PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA56640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | Whirly | ||||||||
Protein Properties | Length: 232aa MW: 25751.9 Da PI: 9.9237 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 183.1 | 5.3e-57 | 57 | 193 | 1 | 137 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePl 99 s++k+kaal + + + f+++dsg lk++r+G +ll++++a+++rkyd+ekkq falsatev++l+ l++ e+ceffhdp++k+s eG v+k+l v Pl PKA56640.1 57 SIFKGKAALVMTPLPARFSKMDSGGLKVDRKGVVLLKFMPAIGQRKYDYEKKQYFALSATEVGSLIGLGPTETCEFFHDPSMKSSLEGLVKKTLTVSPL 155 79************************************************************************************************* PP Whirly 100 pdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsl 137 dG G+f+nlsv n ++k+ne++svPv+kaefav+r + PKA56640.1 156 GDGNGYFFNLSVLNAVQKTNERLSVPVTKAEFAVIRAA 193 ***********************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MLSRLCPRSR NVVYAASFTE KFSYIRDALC SCNLIAQHRV STNTSEHSSG RAYADYSIFK 60 GKAALVMTPL PARFSKMDSG GLKVDRKGVV LLKFMPAIGQ RKYDYEKKQY FALSATEVGS 120 LIGLGPTETC EFFHDPSMKS SLEGLVKKTL TVSPLGDGNG YFFNLSVLNA VQKTNERLSV 180 PVTKAEFAVI RAACGFALPH MMGWSKVMQV QHPEHRGLLP GQRELKMVTD VW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71260.1 | 5e-70 | Whirly family protein |