PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56527.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 300aa    MW: 33320.4 Da    PI: 7.5686
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56527.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.21.7e-094493154
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r++ +  rE+ RRdr+N+ f  L + l ++     +K++Ka+iL  A++ +k+L
  PKA56527.1 44 RKAQKADREKLRRDRLNEQFVDLGKALDPD----RPKNDKATILADAIQVLKDL 93
                5777889********************997....79****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDQSMPTNHV ISKVTMRGHF DVLHIVICSL QRVEQESKGS LNPRKAQKAD REKLRRDRLN  60
EQFVDLGKAL DPDRPKNDKA TILADAIQVL KDLTSQLTQE KNELREEKAA LKSEIDDLNV  120
QYQQRLRCMY PWPTVDPSVA IGPPPPYSFP VAVPVPAGRM PFHASIQPYP FFPNSPPYLS  180
YHSHCNPYAE QQSTQCLPPQ SNSSINRHQS TNQHDTRNPS GSERSAGFSD VATELELKIP  240
GSSVPSNVKP SVTEQKEGRR GNCGSFRVRE AATAAGLVQV GALQTATEVA PWPTVSEFEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.13e-48bHLH family protein