PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA56252.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 429aa MW: 48448.1 Da PI: 5.1718 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 292.1 | 1.5e-89 | 27 | 428 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101 +lL ecA+a+s++d ++q+lL+ l+el+sp+gd q++aayf++AL ++++s+++ y++l + ++++++ +++ ++ f+e+sP+ +f+h++ N+a PKA56252.1 27 NLLRECAKAISDKDSGKIQHLLWMLNELSSPYGDCEQKIAAYFLQALFCKVTDSGERSYRTLLSAAEKTHSFESARKVILKFQEASPWTTFGHVASNSA 125 6899**********************************************************8888876555555555556****************** PP GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvl.vakrledl..eleeLrv 196 I+ea+ege r+HiiD++ ++++QWp+Ll++La+R++++p+l++ +v+s+ ++e+g+r++kfA+ +gvpfefnv+ +rl+++ +++e+ + PKA56252.1 126 IMEALEGEPRLHIIDLSNTYCTQWPTLLESLATRSDETPHLKLSVVVSAPGArGGAVMKEIGQRMEKFARLMGVPFEFNVIsGINRLSEVfvRIKEMIM 224 *********************************************99954447999************************9656688877556677655 PP GRAS 197 kp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse.....................sFlerflealeyysalfdsl 271 + +EalaVn++ +l r+ ++r++++ +++sl+P+vv+vve+ead ++ +F f e+l++y +f+++ PKA56252.1 225 DArdqDEALAVNCMGALRRVE------VDRRRDFIGMMRSLKPRVVTVVEEEADFSGCyvnlddhdhdddhdrsststsTFCGCFEECLRFYGLFFEMM 317 54567**************97......555789*******************99977678889999********************************* PP GRAS 272 eaklpreseerikvErellgreivnvvacegae..rrerhetlekWrerleeaG.Fkpvplsekaakqaklllrkvksdgyrve.......eesgslvl 360 e++++++s+er ++Ere +r+iv ++ac+g++ er+e+ +W +rl+e G F+pv++s++a++++k+llr+++++ +++ + l+l PKA56252.1 318 EESFAPTSSERLMLERE-CARSIVGLLACRGEAeyCCERREKGVQWCRRLSEDGmFSPVAFSDDAVDDVKALLRRYQGR-WSLRpavgregADASGLFL 414 *****************.79**********9984567***************99789********************55.555544666666688999* PP GRAS 361 gWkdrpLvsvSaWr 374 +Wk++p+v++S W+ PKA56252.1 415 TWKEEPVVWASTWK 428 *************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 429 aa Download sequence |
MQTPPDQLFL QRGDIVPATS GSKWAGNLLR ECAKAISDKD SGKIQHLLWM LNELSSPYGD 60 CEQKIAAYFL QALFCKVTDS GERSYRTLLS AAEKTHSFES ARKVILKFQE ASPWTTFGHV 120 ASNSAIMEAL EGEPRLHIID LSNTYCTQWP TLLESLATRS DETPHLKLSV VVSAPGARGG 180 AVMKEIGQRM EKFARLMGVP FEFNVISGIN RLSEVFVRIK EMIMDARDQD EALAVNCMGA 240 LRRVEVDRRR DFIGMMRSLK PRVVTVVEEE ADFSGCYVNL DDHDHDDDHD RSSTSTSTFC 300 GCFEECLRFY GLFFEMMEES FAPTSSERLM LERECARSIV GLLACRGEAE YCCERREKGV 360 QWCRRLSEDG MFSPVAFSDD AVDDVKALLR RYQGRWSLRP AVGREGADAS GLFLTWKEEP 420 VVWASTWKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37650.1 | 1e-139 | GRAS family protein |