PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA56252.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 429aa    MW: 48448.1 Da    PI: 5.1718
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA56252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS292.11.5e-89274283374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lL ecA+a+s++d  ++q+lL+ l+el+sp+gd  q++aayf++AL  ++++s+++ y++l + ++++++ +++ ++   f+e+sP+ +f+h++ N+a
  PKA56252.1  27 NLLRECAKAISDKDSGKIQHLLWMLNELSSPYGDCEQKIAAYFLQALFCKVTDSGERSYRTLLSAAEKTHSFESARKVILKFQEASPWTTFGHVASNSA 125
                 6899**********************************************************8888876555555555556****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvl.vakrledl..eleeLrv 196
                 I+ea+ege r+HiiD++ ++++QWp+Ll++La+R++++p+l++ +v+s+        ++e+g+r++kfA+ +gvpfefnv+   +rl+++  +++e+ +
  PKA56252.1 126 IMEALEGEPRLHIIDLSNTYCTQWPTLLESLATRSDETPHLKLSVVVSAPGArGGAVMKEIGQRMEKFARLMGVPFEFNVIsGINRLSEVfvRIKEMIM 224
                 *********************************************99954447999************************9656688877556677655 PP

        GRAS 197 kp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse.....................sFlerflealeyysalfdsl 271
                 +    +EalaVn++ +l r+        ++r++++ +++sl+P+vv+vve+ead ++                      +F   f e+l++y  +f+++
  PKA56252.1 225 DArdqDEALAVNCMGALRRVE------VDRRRDFIGMMRSLKPRVVTVVEEEADFSGCyvnlddhdhdddhdrsststsTFCGCFEECLRFYGLFFEMM 317
                 54567**************97......555789*******************99977678889999********************************* PP

        GRAS 272 eaklpreseerikvErellgreivnvvacegae..rrerhetlekWrerleeaG.Fkpvplsekaakqaklllrkvksdgyrve.......eesgslvl 360
                 e++++++s+er ++Ere  +r+iv ++ac+g++    er+e+  +W +rl+e G F+pv++s++a++++k+llr+++++ +++         +   l+l
  PKA56252.1 318 EESFAPTSSERLMLERE-CARSIVGLLACRGEAeyCCERREKGVQWCRRLSEDGmFSPVAFSDDAVDDVKALLRRYQGR-WSLRpavgregADASGLFL 414
                 *****************.79**********9984567***************99789********************55.555544666666688999* PP

        GRAS 361 gWkdrpLvsvSaWr 374
                 +Wk++p+v++S W+
  PKA56252.1 415 TWKEEPVVWASTWK 428
                 *************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MQTPPDQLFL QRGDIVPATS GSKWAGNLLR ECAKAISDKD SGKIQHLLWM LNELSSPYGD  60
CEQKIAAYFL QALFCKVTDS GERSYRTLLS AAEKTHSFES ARKVILKFQE ASPWTTFGHV  120
ASNSAIMEAL EGEPRLHIID LSNTYCTQWP TLLESLATRS DETPHLKLSV VVSAPGARGG  180
AVMKEIGQRM EKFARLMGVP FEFNVISGIN RLSEVFVRIK EMIMDARDQD EALAVNCMGA  240
LRRVEVDRRR DFIGMMRSLK PRVVTVVEEE ADFSGCYVNL DDHDHDDDHD RSSTSTSTFC  300
GCFEECLRFY GLFFEMMEES FAPTSSERLM LERECARSIV GLLACRGEAE YCCERREKGV  360
QWCRRLSEDG MFSPVAFSDD AVDDVKALLR RYQGRWSLRP AVGREGADAS GLFLTWKEEP  420
VVWASTWKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-139GRAS family protein