PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA56204.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

MYB_related

Protein Properties

Length: 1630aa MW: 176644 Da PI: 5.991

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA56204.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.5	5.6e-07	918	956	4	44
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 WT eE +++a + +G++ + +I++ + +R++ qc ++ PKA56204.1 918 WTDEEKSMFIRALNIYGKD-FIKISNFLR-TRSRDQCMIFF 956 ***************99.*****.*****7655 PP

Sequence ? help Back to Top
Protein Sequence Length: 1630 aa Download sequence
MPNILADARG DKFLVYSGGR GIQVQPGLFI FIGSRFLPLS AQLGASFLLR HRVAHRNLAA 60 AAAAAVAALE ALITFFFFSL SRRWSCRSSA EVGKATVLSS CPPPFDLCPG LDLPGIHTGA 120 RLRFQYFLFH EGWIGRHRIA REPLPWERKE FKDRKHERGA GSDAGGGGLT SRWREPFHAP 180 RDYSRASPRR PFQGNHRYAG GYYQPYPEES GGNGCTPSRS GDRVFPEDGA FRRSSGRYSG 240 GGRSSGGFGR EGRGSLRRSP YLDSGNDFPR LNDDFPVTAQ RSVVVPVERL SLTSSSPIAV 300 KDLHEKSGDG VGDVGGTSQK DDRDHSLSSI DWQPLKWSRS GSLPSSKKVR SESEEVGLEI 360 SVPPGKETPL WSPLTSPLPS DDGAPRKKPR LGWGQGLAKY EKQKIEGSAD ISCQDELVQS 420 TNSAKELISD SSPKVVTIAG SVSPATPTSA TCSSSPGVDV KLLVKDLNVD TDKASYNDLS 480 NLGPPNPLEE FSIKLDQLDA NVLRTLAAIL SDLIQPEDAC SGDSSFTRYS TINKLLLLKK 540 DVSKELEKTE YEIDLLENEL KSLQSEIHGV VQHSLDSVDD LKALSQLSTS DKYVQTPLLI 600 QEVGSTCVSE DTGTEISDGK HDSSGAVLVD AVKSSYVERQ SSDSISVHPI VCPVSINSSK 660 QGLDVQPLIQ PAVEVPSYGC CNDTSRHADL ACFDTRAIGK ADYDLVGLIM ASNRDSAKSA 720 SQVFDEVIPS SLSQFNFWES DKFLQCRKNY MFVREKVARP KKRLKLRNQW QNLQRNMYLM 780 ASGPKLNREA NAVSLDLLGG ASLISTQRRS SNKSFQKHGG KSACHDISHG RHGSVERVSS 840 VEISGNEKET AAADVLAGIC GAFSSEAISS SVTSSVDPVD KVNFATADQC PTSEVSQAIV 900 EEDPYSDEGS GEFESADWTD EEKSMFIRAL NIYGKDFIKI SNFLRTRSRD QCMIFFSKSR 960 KCLGLDVIQS GSGNGVTPQS DVNGGRSDTD DGCAAEIDSA ICSTQSCSKM DPDFTQAMSK 1020 SGTDGYIHPD NTTPTDTDRS CEQFEVAGST PDALHGKIGK HSLVAADEDE IVIERDSDLG 1080 EAQEKINCAE LISIEHGASE LLVDVKFKNM PTGFILSPAK PVAKLHVKDH LTELQAVAEV 1140 SENGTSEKTK TDELTSEVDS KQFGTLLDSV VEFQSTPFIE QVADVGDSVC IALNSKCNPS 1200 DIADPKKDCA SVVSSLDVHR HMPVELLRLL HKRACDKPEE SGSVLQTLVS HVLTNSSSMS 1260 YDGPGHASSQ ANLTFQNPEV RWLSGLDSSV SEYSQKHLLK NLLANPAKIP LTVIRGFPFQ 1320 SASENLRAMT VDNNADKNNN ADKNSSPGHP LNSNLACRSN YFPISRMNNE KCGGLDLSNS 1380 RTGDKSNAIQ TADPSSSYHT CLQGGSSAEM DEQSQRTGDV KLFGQILTHP SSQKHCSSQE 1440 VDIIPPSPSE NESAPTKLSR WVKNTSVLGT MKNGCFLHQQ GELPLRSYGF WDGSRIQTGL 1500 SSLPESALTL AKYQSSLNTT PLGTVMDTVT NRTVGRDFQQ QAYIQPFSAE KLLETIPELQ 1560 KRGSFEMVSG YQPQGRIAHL GTNIVGGGGF VVGSAGAPDP VASLQMHYSG RRAKILSGDL 1620 ESWSGDRGGR

Sequence ? help Back to Top

Protein Sequence Length: 1630 aa Download sequence

MPNILADARG DKFLVYSGGR GIQVQPGLFI FIGSRFLPLS AQLGASFLLR HRVAHRNLAA  60
AAAAAVAALE ALITFFFFSL SRRWSCRSSA EVGKATVLSS CPPPFDLCPG LDLPGIHTGA  120
RLRFQYFLFH EGWIGRHRIA REPLPWERKE FKDRKHERGA GSDAGGGGLT SRWREPFHAP  180
RDYSRASPRR PFQGNHRYAG GYYQPYPEES GGNGCTPSRS GDRVFPEDGA FRRSSGRYSG  240
GGRSSGGFGR EGRGSLRRSP YLDSGNDFPR LNDDFPVTAQ RSVVVPVERL SLTSSSPIAV  300
KDLHEKSGDG VGDVGGTSQK DDRDHSLSSI DWQPLKWSRS GSLPSSKKVR SESEEVGLEI  360
SVPPGKETPL WSPLTSPLPS DDGAPRKKPR LGWGQGLAKY EKQKIEGSAD ISCQDELVQS  420
TNSAKELISD SSPKVVTIAG SVSPATPTSA TCSSSPGVDV KLLVKDLNVD TDKASYNDLS  480
NLGPPNPLEE FSIKLDQLDA NVLRTLAAIL SDLIQPEDAC SGDSSFTRYS TINKLLLLKK  540
DVSKELEKTE YEIDLLENEL KSLQSEIHGV VQHSLDSVDD LKALSQLSTS DKYVQTPLLI  600
QEVGSTCVSE DTGTEISDGK HDSSGAVLVD AVKSSYVERQ SSDSISVHPI VCPVSINSSK  660
QGLDVQPLIQ PAVEVPSYGC CNDTSRHADL ACFDTRAIGK ADYDLVGLIM ASNRDSAKSA  720
SQVFDEVIPS SLSQFNFWES DKFLQCRKNY MFVREKVARP KKRLKLRNQW QNLQRNMYLM  780
ASGPKLNREA NAVSLDLLGG ASLISTQRRS SNKSFQKHGG KSACHDISHG RHGSVERVSS  840
VEISGNEKET AAADVLAGIC GAFSSEAISS SVTSSVDPVD KVNFATADQC PTSEVSQAIV  900
EEDPYSDEGS GEFESADWTD EEKSMFIRAL NIYGKDFIKI SNFLRTRSRD QCMIFFSKSR  960
KCLGLDVIQS GSGNGVTPQS DVNGGRSDTD DGCAAEIDSA ICSTQSCSKM DPDFTQAMSK  1020
SGTDGYIHPD NTTPTDTDRS CEQFEVAGST PDALHGKIGK HSLVAADEDE IVIERDSDLG  1080
EAQEKINCAE LISIEHGASE LLVDVKFKNM PTGFILSPAK PVAKLHVKDH LTELQAVAEV  1140
SENGTSEKTK TDELTSEVDS KQFGTLLDSV VEFQSTPFIE QVADVGDSVC IALNSKCNPS  1200
DIADPKKDCA SVVSSLDVHR HMPVELLRLL HKRACDKPEE SGSVLQTLVS HVLTNSSSMS  1260
YDGPGHASSQ ANLTFQNPEV RWLSGLDSSV SEYSQKHLLK NLLANPAKIP LTVIRGFPFQ  1320
SASENLRAMT VDNNADKNNN ADKNSSPGHP LNSNLACRSN YFPISRMNNE KCGGLDLSNS  1380
RTGDKSNAIQ TADPSSSYHT CLQGGSSAEM DEQSQRTGDV KLFGQILTHP SSQKHCSSQE  1440
VDIIPPSPSE NESAPTKLSR WVKNTSVLGT MKNGCFLHQQ GELPLRSYGF WDGSRIQTGL  1500
SSLPESALTL AKYQSSLNTT PLGTVMDTVT NRTVGRDFQQ QAYIQPFSAE KLLETIPELQ  1560
KRGSFEMVSG YQPQGRIAHL GTNIVGGGGF VVGSAGAPDP VASLQMHYSG RRAKILSGDL  1620
ESWSGDRGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	2e-26	MYB family protein