PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA55590.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TCP

Protein Properties

Length: 300aa MW: 31684.2 Da PI: 6.4187

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA55590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	113	4e-35	2	75	3	66
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........s 66 g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LGfd++sk+++WL+++akpai++l+++ s PKA55590.1 2 GRKDRHSKVCTARGLRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIRNAKPAIDQLAELpqwlstadppS 75 79************************************************************977776433321 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGRKDRHSKV CTARGLRDRR VRLSAHTAIQ FYDVQDRLGF DRPSKAVDWL IRNAKPAIDQ 60 LAELPQWLST ADPPSAPAAA DITGEDPLHA AGSGYDSGLL LPPSLDSDSI ADTLKSFFPM 120 AGAASSSRAS VGYHVYSSAP DLLSHVVEGE AVAAPASGNR SGDLRLSLQS YQDPVIFHHQ 180 QNRNIAAQQP LLTFGAGTSG IGAGGSLYGW PPQLFQSQLL TQWGPLQSSN PPSIRPWAEP 240 TALAAASGYQ MPMAAFRSSS TSLVPITGDV VGFSGFHFPA RSQGGEEEGG DAAASSSSHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53230.1	1e-36	TCP family protein