PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54999.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family C2H2
Protein Properties Length: 211aa    MW: 22473 Da    PI: 10.6355
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54999.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.50.00096155175121
                 EEETTTTEEESSHHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHir 21 
                 ++C+ Cg  Fs+  +L  H+r
  PKA54999.1 155 HECSVCGSKFSSEQTLGGHMR 175
                 78*****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MESQEEALGS NSCSGDSPYP SFTRRKRTVR QRAAPLPPAA AAAATSSLAS SAEDSGITDQ  60
KDIGTTSSSS PKAATFPRTN SAAPPRGDSL VGGSPSAKPA SSASPPSRPS AATEQATRSP  120
KHRPWYWRLS ATYKLEPPPP ATLAGKDGAG TAKIHECSVC GSKFSSEQTL GGHMRERERE  180
ILRKDRKFQK NSVPVRLSYS QITQKKARIF D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1182188LRKDRKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-07C2H2 family protein