PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA54796.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 299aa    MW: 33913.1 Da    PI: 6.293
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA54796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-08137184455
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +h+ +Er RR++i +++  L+ l+P +    +k + Ka +L + ++Y++sLq
  PKA54796.1 137 SHSLAERVRREKISERMKMLQGLVPGC----DKVVGKALMLDEIINYVQSLQ 184
                 8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MAAFTYYQSN QQPFLLDSTE EMSSASSSFL YYQGLAEPIP ESSSTEAKSR SSSVNNANGA  60
HHNFHYQRME KKRRRNGPNL ISAQSKEKKE GGRRKQKKPI EEGEEEEEEE KKKTKAGDEP  120
PEGYIHVRAR RGMATDSHSL AERVRREKIS ERMKMLQGLV PGCDKVVGKA LMLDEIINYV  180
QSLQNQVEFL SMKLACVNPM LYDLADVDYD CAINKTEFEL GLGITPQDSQ NLQSLLQTSL  240
IQPTGLDQST EREYQVMNHH IPPHHVLQAQ GPIPLHQDEG NFVMQLGDQL SQKNMGFFH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17197KKRRRNGPNLISAQSKEKKEGGRRKQK
27198KKRRRNGPNLISAQSKEKKEGGRRKQKK
37299KKRRRNGPNLISAQSKEKKEGGRRKQKK
47397RRRNGPNLISAQSKEKKEGGRRKQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.24e-47bHLH family protein