PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA54537.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 210aa MW: 24536.2 Da PI: 10.465 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.5 | 1e-15 | 20 | 64 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g W + Ede+l ++v+++G+ +W+ Ia+++ gR++k+c++rw++ PKA54537.1 20 GHWRPGEDEKLRQLVEEFGPQNWNFIAEKLK-GRSGKSCRLRWFNQ 64 67****************************9.***********996 PP | |||||||
2 | Myb_DNA-binding | 55.7 | 1.2e-17 | 71 | 114 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T++E+e+l++a++ +G++ W++Iar ++ gRt++ k++w+ PKA54537.1 71 RRPFTEDEEEKLLEAHRIHGNK-WALIARLFP-GRTDNAMKNHWHV 114 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MLERAAARTK EMAKVRCPQG HWRPGEDEKL RQLVEEFGPQ NWNFIAEKLK GRSGKSCRLR 60 WFNQLNPRIN RRPFTEDEEE KLLEAHRIHG NKWALIARLF PGRTDNAMKN HWHVIMARRR 120 RERAKVIENK GVHQLHHLLN GTSKYLPFYD ILESSCHRSL PPPMRIVVGS LHHVLKGGRP 180 SCGVHDQREE GESLKGKDVE YIDFMGVGRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 2e-64 | MYB family protein |