PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PKA54318.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
|
||||||||
Family | Dof | ||||||||
Protein Properties | Length: 191aa MW: 20924.8 Da PI: 7.3104 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 105.9 | 2.3e-33 | 36 | 93 | 4 | 61 |
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + +cprC s +tkfCyynny +sqPr+fC++Crr+Wt GG++rnvP+Gg++rk++++ PKA54318.1 36 NRERCPRCSSLDTKFCYYNNYRTSQPRHFCRSCRRHWTLGGSIRNVPIGGASRKRHRA 93 5679**************************************************9875 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 191 aa Download sequence |
MKSMEAASTG LRKPGIRPYT PLAPAALAAV EAAEPNRERC PRCSSLDTKF CYYNNYRTSQ 60 PRHFCRSCRR HWTLGGSIRN VPIGGASRKR HRANPYPKPA AVTDQHPPPS FLLVDAPPVA 120 ATEAPLPSAC FGLSDSPPLD GMFDVGLAQL EWPPEILALE MFGSFEKTCW TTESCFDDGD 180 LYNVPVVDAS L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G45610.1 | 3e-28 | Dof family protein |