PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA54286.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | C2H2 | ||||||||
Protein Properties | Length: 171aa MW: 18893.6 Da PI: 9.3899 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12 | 0.00063 | 78 | 100 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C k F++ L H++ H PKA54286.1 78 YQCSICLKGFPTGQALGGHMSHH 100 9*******************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MISLLIRVPS PVGSSDESSN LLVEKGSKRK RSEHKCSLCG DAFPSHERYL GGHKTSHRNA 60 LSKSATDAST ATESRRIYQC SICLKGFPTG QALGGHMSHH CDFTEASCIA RSSTMPVTSL 120 LSSTEFELNI PPAPETRLET VGRCGLLEKE DRVLKALPYK KRFSIKFWSR H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 2e-16 | C2H2 family protein |