PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA54231.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 329aa MW: 36437 Da PI: 7.2137

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA54231.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.5	2.5e-09	253	288	20	55
HHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 20 eknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ PKA54231.1 253 YKWPYPSETEKVALAESTGLDQKQINNWFINQRKRH 288 4679*****************************885 PP
2	ELK	30.6	7.7e-11	208	229	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +Ll+KYsgyL+sL+qE+s PKA54231.1 208 ELKLHLLKKYSGYLSSLRQELS 229 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MEEFSHFGTS STRGPFAYAS SPAPAPAPTS FFYGPAKVEA GSSQYSHEVD SMKAKIVSHP 60 QYAALLIAYM DCQKVGAPPE VASRLSAAAR ELEARRQAGV AGYRQDAPAD PELDQFMEAY 120 CNMLVKYKEE LTRPVQEAMN FLKKAESQLH SMTNGGGSAA SATAAAAAAP LFSSVEKRER 180 IVSSEEGPDG SGVEAEAAEI DPRTEDKELK LHLLKKYSGY LSSLRQELSK KKKKGKLPKE 240 ARQKLLNWWE LHYKWPYPSE TEKVALAEST GLDQKQINNW FINQRKRHWK PSEDMQFVVM 300 DSFDQQNAAA LYMGGQFFAA ADGAYRFGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	3e-90	TALE family protein