PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53649.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 461aa MW: 49373.1 Da PI: 5.2607 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 301.6 | 1.9e-92 | 61 | 457 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...........sseelaalkl..fsev 87 ++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+a f++AL r +rs+s ++al++ +s s +l+a++l f ++ PKA53649.1 61 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTAAFLRALIVRASRSGSASCAALASAMASVAAapshpsvaaadPSLRLSAVSLagFIDL 159 79****************************************************88877766655555444434335544444333444445588**** PP GRAS 88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvlv 182 +P+++f++ +aN aI eaveg + +Hi+D++ ++ +Q p+L+++La Rp+gpp +R+T+ ++ l e+g++L +fA++ +v +ef+++ PKA53649.1 160 TPWHRFGFSAANAAIAEAVEGFQVIHIVDLSTTHSMQLPTLIDSLAGRPDGPPFIRLTVPCFDGNSppplLDMPLDELGSKLVNFARSRNVGMEFRAVP 258 **********************************************************9665444456788899***********************95 PP GRAS 183 akrledl..eleeLrvkp......gEalaVnlvlqlhrlldesv..sleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271 ++ ++ l +e+Lrv++ Eal++n++++lhr++des+ s++s+r+++Lk ++sl P++vvvv+++ad ++++ + r+ a++y++ fd++ PKA53649.1 259 SSPTDGLqsMIEQLRVQQlingheTEALIINCHMMLHRIPDESAgaSIPSPRTAFLKSLRSLDPTLVVVVDEDADFTAGDVVGRLRAAFNYMWIPFDAV 357 5444444223666666666666679*****************97225666************************************************* PP GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370 e+ lp se+r+ +E++ +g++i+nv+a+eg r+er et ++W +r++ aGF+ ++e+aa+++k +l +++ g+ ++ +++ lvl+Wk++ +v++ PKA53649.1 358 ETFLPVGSEQRRRYEAA-VGWKIENVIAQEGVGRVERLETRGRWVQRMRGAGFHGGGFGEEAAAEVKGMLDEHS-AGWGMKRDEDDLVLTWKGHDVVFA 454 *****************.*******************************************************9.8899999***************** PP GRAS 371 SaW 373 SaW PKA53649.1 455 SAW 457 *** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 461 aa Download sequence |
MMQFTESAAP APPHYSSGFP GLCLDLAAAG GANGGAVRSR PWPDLPSSVK SLGSYNAACM 60 EQLLVHCANA IESNDATLAQ QILWVLNNIA PPDGDSNQRL TAAFLRALIV RASRSGSASC 120 AALASAMASV AAAPSHPSVA AADPSLRLSA VSLAGFIDLT PWHRFGFSAA NAAIAEAVEG 180 FQVIHIVDLS TTHSMQLPTL IDSLAGRPDG PPFIRLTVPC FDGNSPPPLL DMPLDELGSK 240 LVNFARSRNV GMEFRAVPSS PTDGLQSMIE QLRVQQLING HETEALIINC HMMLHRIPDE 300 SAGASIPSPR TAFLKSLRSL DPTLVVVVDE DADFTAGDVV GRLRAAFNYM WIPFDAVETF 360 LPVGSEQRRR YEAAVGWKIE NVIAQEGVGR VERLETRGRW VQRMRGAGFH GGGFGEEAAA 420 EVKGMLDEHS AGWGMKRDED DLVLTWKGHD VVFASAWLPS F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49950.1 | 1e-137 | GRAS family protein |