PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53632.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 494aa    MW: 54007.2 Da    PI: 5.733
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53632.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS314.42.4e-96944933374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 +lLl+cA+a +s+d +l+q+lL+ l+el+sp gd  q+la+yf++AL +rl++s+ ++ ++l++ +++  + +++   l  f+e+sP+  f+h++aN a
  PKA53632.1  94 DLLLACARAAASRDGSLVQHLLWALNELSSPFGDLDQKLASYFLQALFSRLTSSGRRTLRTLSSASDRAASFDSTRRTLLRFQELSPWSSFGHVAANGA 192
                 68**********************************************************999988885554444444444****************** PP

        GRAS 102 Ileavege.........ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledl 189
                 Ile++  +          r+Hi+D++ + ++QWp+Ll+aLa+R+ +++p+l iT+v+++++   ++ ++e+g r++kfA+ +gvpf+f+v+++ + +dl
  PKA53632.1 193 ILESFLDAagdpaaptpARLHILDLSSTFCTQWPTLLEALATRSaDDTPHLSITTVVPSAAAgAQRVMREIGARMEKFARLMGVPFRFSVIHHPADADL 291
                 ****987777788888899*************************889*********998877899*************************966666666 PP

        GRAS 190 eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse.......sFlerflealeyysalfdsleaklpres 279
                 +  ++++    g alaVn+v +l ++     +   +r+++L  +++l+P+vv++ve+ead++s         Fl++f eal+++sa fdsle+++p++s
  PKA53632.1 292 SAVDIDCLVdgGSALAVNCVNSLRNVS----PAGRRREALLAKIRRLRPRVVTLVEEEADLSSDagdggdeGFLKGFEEALRFFSAYFDSLEESFPKTS 386
                 66666544445*************998....55566789*******************99966557888889*************************** PP

        GRAS 280 eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve....ee..........sgslvlgWkd 364
                 +er  +Er+  gr++v++vac+ +e++er+ t++ W++r+++aGF+p+++se++ +++++llr++  +g+++     e            + ++l Wk+
  PKA53632.1 387 NERLALERA-AGRAVVDLVACAATESTERRDTAAGWSRRMRHAGFSPAEFSEDVSDDVRALLRRYR-EGWSMRpaveEAdessssgggeAAGIFLSWKE 483
                 *********.********************************************************.666555445322667888887677788***** PP

        GRAS 365 rpLvsvSaWr 374
                 +p+v++SaW+
  PKA53632.1 484 QPVVWASAWK 493
                 *********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    
MDTLFRLVSH HQSSDHHQQQ SSLNSSRTST TSDRSPFFFL PQDDDDEECG NTHHPSALSM  60
DDDLSSSSSP SKHLLPPPPP FLSNPNPHRR WAPDLLLACA RAAASRDGSL VQHLLWALNE  120
LSSPFGDLDQ KLASYFLQAL FSRLTSSGRR TLRTLSSASD RAASFDSTRR TLLRFQELSP  180
WSSFGHVAAN GAILESFLDA AGDPAAPTPA RLHILDLSST FCTQWPTLLE ALATRSADDT  240
PHLSITTVVP SAAAGAQRVM REIGARMEKF ARLMGVPFRF SVIHHPADAD LSAVDIDCLV  300
DGGSALAVNC VNSLRNVSPA GRRREALLAK IRRLRPRVVT LVEEEADLSS DAGDGGDEGF  360
LKGFEEALRF FSAYFDSLEE SFPKTSNERL ALERAAGRAV VDLVACAATE STERRDTAAG  420
WSRRMRHAGF SPAEFSEDVS DDVRALLRRY REGWSMRPAV EEADESSSSG GGEAAGIFLS  480
WKEQPVVWAS AWKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-118GRAS family protein