PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53574.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 532aa    MW: 57410.9 Da    PI: 7.9429
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53574.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS182.53e-561375042374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl..fsevsPilkfshlta 98 
                 ++lL  +A a+++ +++++q+lL  l+elasp+gd+++Rla+y ++ L +rl++ + ++ +a +++ ++  +++ +l+   l  f+e+sP++ f + +a
  PKA53574.1 137 EQLLNPFAAAIDAANTSRVQHLLYVLQELASPTGDANHRLAFYGLQSLTRRLSSAGLGITAAAAATVATYATTEPRLFRSALikFHEISPWFAFPNCLA 235
                 68999*************************************************999999988777776555555555544468*************** PP

        GRAS  99 NqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                 N+ Il a++++   + + +iD ++s+G+QWp+Ll+aLa Rp+g+p  +R+T+v+++++     + +    +  L ++A++++++f+ +    ++l +  
  PKA53574.1 236 NSSILAAAASAgtdTSLRVIDAGVSHGVQWPTLLEALARRPGGTPkIVRLTVVKDEATApfaAAPAGYDFAPHLLRYAKSIDLNFRVDQT--EALPAA- 331
                 *******9988777899************************8888689*******988899999999****************9998872..333333. PP

        GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nse.....sFlerflealeyysalfdsleaklpreseeri 283
                   + r+ ++E++++++++   r+          r+ +L++++++ P++vv++e    + +s+      ++ +f +  e+++++++s++a +    + r 
  PKA53574.1 332 AAAKRTAREETVVICSQMWAGRV----------RTGFLRAMREMDPDLVVLSETGEGMiGSGegdrvGLAGGFGRRAEVMWKFLESTSAAF----KGRE 416
                 33335566777777776655555..........468*****************984443554566669*******************8886....7777 PP

        GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   Er++++ e+  ++     e       +e+Wrer+e  GF + +++e+a++  ++llrk++ ++++r     + + l Wk++p++++S W+
  PKA53574.1 417 CEERRVMEGEAARILDEWDGE----WAGKERWRERMEGEGFMEERIGEEAVEAGRALLRKYDgNWEMRAGGAAAGVGLWWKGQPVTFCSLWK 504
                 777777777788887766555....78999********************************888899999999999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    
MDWLEDSISF LPNFLDDSYG VPEEIAQCDW WPQDQHQAHF PTHFSETIAA VAAVAAAPAA  60
TALDPLPGTP KSEFSKKRKL PANPSAGQRR RIASGSEGHG ENAENRKSQL GGGKKGYGKG  120
SGGNSGGSAS KEARWAEQLL NPFAAAIDAA NTSRVQHLLY VLQELASPTG DANHRLAFYG  180
LQSLTRRLSS AGLGITAAAA ATVATYATTE PRLFRSALIK FHEISPWFAF PNCLANSSIL  240
AAAASAGTDT SLRVIDAGVS HGVQWPTLLE ALARRPGGTP KIVRLTVVKD EATAPFAAAP  300
AGYDFAPHLL RYAKSIDLNF RVDQTEALPA AAAAKRTARE ETVVICSQMW AGRVRTGFLR  360
AMREMDPDLV VLSETGEGMI GSGEGDRVGL AGGFGRRAEV MWKFLESTSA AFKGRECEER  420
RVMEGEAARI LDEWDGEWAG KERWRERMEG EGFMEERIGE EAVEAGRALL RKYDGNWEMR  480
AGGAAAGVGL WWKGQPVTFC SLWKPAKKAS AAMPTAARQQ KMKHSPLFLS PP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17079PKSEFSKKRK
27691KKRKLPANPSAGQRRR
37792KKRKLPANPSAGQRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.11e-67GRAS family protein