PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53494.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 507aa MW: 54153.3 Da PI: 4.8291 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 268.4 | 2.4e-82 | 115 | 483 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdle..laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 lv+lL+++Aea+s ++++ la+ +L rl+el + + m+Rla++ft AL++ l + ++l +t + ++l+al+l++++sP+ f++lt PKA53494.1 115 LVHLLMAAAEAISGEQMNrgLARVILVRLKELLAGGVSGMERLATHFTDALQSLLDS-AEGLR----RGNT-GYPAGDVLTALQLLQDMSPCASFAYLT 207 68**********987777669**************99******************99.33333....3333.3557899******************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLa...sRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193 aNqaIleav+ge+rvHi+Df++++G+QW++L+qaLa +R+ pp lRiT++ + +s+ + +etg+rL+ fA+++g pf+f++ ++ + +++ PKA53494.1 208 ANQAILEAVAGERRVHIVDFNVNEGVQWASLIQALAgwsNRATAPPYLRITAITGGNRKSSAAAQETGRRLSAFAASIGQPFSFRTSRLHQGRIFMPSA 306 ***********************************977778899***********9999***************************878899999**** PP GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse.......sFlerflealeyysalfdsleaklpreseerikv 285 ++ +gEa++Vn++ ++ +++ ++L l +++v+vve+e+ +++ F+ rf+ le y+al +sle+++p + + r v PKA53494.1 307 VKLVKGEAVVVNCAQ-IKPCS--RAA----VGSFLAGAEALGARIVTVVEEESVITGAgggegdrGFVGRFMGELERYMALWESLETGYPLQGRVRGLV 398 *************98.44433..344....456*******************6664444556666********************************** PP GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaW 373 E++++g++i+ +v + e++e++++W + +aGF+ v +s ++ +qa+lll ++ dgyr++ e + lvl Wk+r+L+++S+W PKA53494.1 399 EKVIMGPRITGAVRRAYGLPPEERESAAEWAA---AAGFGRVGMSFFNLCQARLLLGLFN-DGYRIDrEGTNKLVLSWKSRRLLAASVW 483 ****************99999999******86...79***********************.******555999**************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 507 aa Download sequence |
MELGVEYMAD LMISAGSSTT TVEGDLSLNC LSPEVNWWQV PQDDDDFRRL IAPAISQSSD 60 FSTPNGLSDE SCCFQSSKTA GDTPTEEPTS PAAGDTPMEE PTSPAAGEED KALRLVHLLM 120 AAAEAISGEQ MNRGLARVIL VRLKELLAGG VSGMERLATH FTDALQSLLD SAEGLRRGNT 180 GYPAGDVLTA LQLLQDMSPC ASFAYLTANQ AILEAVAGER RVHIVDFNVN EGVQWASLIQ 240 ALAGWSNRAT APPYLRITAI TGGNRKSSAA AQETGRRLSA FAASIGQPFS FRTSRLHQGR 300 IFMPSAVKLV KGEAVVVNCA QIKPCSRAAV GSFLAGAEAL GARIVTVVEE ESVITGAGGG 360 EGDRGFVGRF MGELERYMAL WESLETGYPL QGRVRGLVEK VIMGPRITGA VRRAYGLPPE 420 ERESAAEWAA AAGFGRVGMS FFNLCQARLL LGLFNDGYRI DREGTNKLVL SWKSRRLLAA 480 SVWSPSPAPA TSQVFGWESP DALTDSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G08250.1 | 8e-92 | GRAS family protein |