PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53494.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 507aa    MW: 54153.3 Da    PI: 4.8291
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS268.42.4e-821154831373
        GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                 lv+lL+++Aea+s ++++  la+ +L rl+el +   + m+Rla++ft AL++ l +  ++l       +t  +   ++l+al+l++++sP+  f++lt
  PKA53494.1 115 LVHLLMAAAEAISGEQMNrgLARVILVRLKELLAGGVSGMERLATHFTDALQSLLDS-AEGLR----RGNT-GYPAGDVLTALQLLQDMSPCASFAYLT 207
                 68**********987777669**************99******************99.33333....3333.3557899******************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLa...sRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                 aNqaIleav+ge+rvHi+Df++++G+QW++L+qaLa   +R+  pp lRiT++   + +s+ + +etg+rL+ fA+++g pf+f++   ++   + +++
  PKA53494.1 208 ANQAILEAVAGERRVHIVDFNVNEGVQWASLIQALAgwsNRATAPPYLRITAITGGNRKSSAAAQETGRRLSAFAASIGQPFSFRTSRLHQGRIFMPSA 306
                 ***********************************977778899***********9999***************************878899999**** PP

        GRAS 194 LrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse.......sFlerflealeyysalfdsleaklpreseerikv 285
                  ++ +gEa++Vn++  ++     +++      ++L     l +++v+vve+e+  +++        F+ rf+  le y+al +sle+++p + + r  v
  PKA53494.1 307 VKLVKGEAVVVNCAQ-IKPCS--RAA----VGSFLAGAEALGARIVTVVEEESVITGAgggegdrGFVGRFMGELERYMALWESLETGYPLQGRVRGLV 398
                 *************98.44433..344....456*******************6664444556666********************************** PP

        GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve.eesgslvlgWkdrpLvsvSaW 373
                 E++++g++i+ +v  +     e++e++++W +   +aGF+ v +s ++ +qa+lll  ++ dgyr++ e  + lvl Wk+r+L+++S+W
  PKA53494.1 399 EKVIMGPRITGAVRRAYGLPPEERESAAEWAA---AAGFGRVGMSFFNLCQARLLLGLFN-DGYRIDrEGTNKLVLSWKSRRLLAASVW 483
                 ****************99999999******86...79***********************.******555999**************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    
MELGVEYMAD LMISAGSSTT TVEGDLSLNC LSPEVNWWQV PQDDDDFRRL IAPAISQSSD  60
FSTPNGLSDE SCCFQSSKTA GDTPTEEPTS PAAGDTPMEE PTSPAAGEED KALRLVHLLM  120
AAAEAISGEQ MNRGLARVIL VRLKELLAGG VSGMERLATH FTDALQSLLD SAEGLRRGNT  180
GYPAGDVLTA LQLLQDMSPC ASFAYLTANQ AILEAVAGER RVHIVDFNVN EGVQWASLIQ  240
ALAGWSNRAT APPYLRITAI TGGNRKSSAA AQETGRRLSA FAASIGQPFS FRTSRLHQGR  300
IFMPSAVKLV KGEAVVVNCA QIKPCSRAAV GSFLAGAEAL GARIVTVVEE ESVITGAGGG  360
EGDRGFVGRF MGELERYMAL WESLETGYPL QGRVRGLVEK VIMGPRITGA VRRAYGLPPE  420
ERESAAEWAA AAGFGRVGMS FFNLCQARLL LGLFNDGYRI DREGTNKLVL SWKSRRLLAA  480
SVWSPSPAPA TSQVFGWESP DALTDSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.18e-92GRAS family protein