PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53493.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 494aa    MW: 52966.2 Da    PI: 5.2163
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53493.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS288.32e-88984761373
        GRAS   1 lvelLlecAeavss.gdlelaqalLarlsel.....aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                 lv+lL+++Aea++  +  +la+ +Larl+e      a+ + + m+Rl+++ft AL + l +        lpp +++   sse++aa++l++++sP++kf
  PKA53493.1  98 LVHLLMAAAEAIAGcQGSQLAHVILARLNESlhlplAAGEPSGMERLTSHFTVALWRLLRD-------GLPPADDE-LCSSEVVAAFELLQDLSPYVKF 188
                 68***********967788**********98766444444579************988887.......66666664.669999**************** PP

        GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLa.sRpegpp.slRiTgvgspesg.....skeeleetgerLakfAeelgvpfefnvlvakr 185
                 +hltaNqaI eav ge+r+Hi+Dfdi++G+QWp+L+qaL   ++ +pp +lRiT+v ++         ++++ etg+rLa fA+++g+pf+f+    + 
  PKA53493.1 189 GHLTANQAIIEAVVGERRIHIVDFDIMEGVQWPSLMQALVtMKNVPPPaHLRITAVTRAGGRrrsptAATSVGETGRRLAAFAASIGLPFSFRQCRLEP 287
                 ***************************************9556666667********9654478888999************************9999* PP

        GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.......adhnsesFlerflealeyysalfdsleaklpr 277
                   ++++ + +v +gEa++ n++l+  +   +s+++     ++L     l ++vv++ve+e       +  +++ F+ rf+e +  ysa++dslea++p+
  PKA53493.1 288 GGSFRPASVKVVRGEAVVFNCALHPPHQRYHSAATVG---SFLAGAAALGARVVTLVEEEgtggcagVGEEEKGFVWRFMEEMLRYSAILDSLEAGFPE 383
                 **********************987666655655555...8*******************66554333335569************************* PP

        GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWkdrpLvsvSaW 373
                 e+ +r +vEr++l+++i  +v  + ++   r+  ++ W+e++++aGF+ v +s  +  qaklll  ++ +gy +ee+ ++ l+l Wk+rpLv +S+W
  PKA53493.1 384 EKTARETVERVILAPRIAGAVDVAYRW---RNDWVAGWSEWMSAAGFRRVVMSAANHWQAKLLLGLFN-EGYGIEEDnENKLLLRWKSRPLVGASVW 476
                 ***************************...888899********************************.9*****98456788************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    
MAEVSELLFP AWTSDYIITA PADKPPAVGF SPFSCSPEAM DWLGPSAPDV FGYAESSPET  60
ADHWSSAATS SSTSAVGTPA DASLAGSCDG DDEKGQRLVH LLMAAAEAIA GCQGSQLAHV  120
ILARLNESLH LPLAAGEPSG MERLTSHFTV ALWRLLRDGL PPADDELCSS EVVAAFELLQ  180
DLSPYVKFGH LTANQAIIEA VVGERRIHIV DFDIMEGVQW PSLMQALVTM KNVPPPAHLR  240
ITAVTRAGGR RRSPTAATSV GETGRRLAAF AASIGLPFSF RQCRLEPGGS FRPASVKVVR  300
GEAVVFNCAL HPPHQRYHSA ATVGSFLAGA AALGARVVTL VEEEGTGGCA GVGEEEKGFV  360
WRFMEEMLRY SAILDSLEAG FPEEKTARET VERVILAPRI AGAVDVAYRW RNDWVAGWSE  420
WMSAAGFRRV VMSAANHWQA KLLLGLFNEG YGIEEDNENK LLLRWKSRPL VGASVWAAPA  480
PSSGECGRLG LFPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-109GRAS family protein