PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53464.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB_related | ||||||||
Protein Properties | Length: 227aa MW: 26013 Da PI: 5.9169 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.8 | 3.3e-15 | 10 | 55 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +eE++l+++++ +lG++ W++Ia +++ gRt++++k++w+++l PKA53464.1 10 RGNIGPEEEDLIIRLHCLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 55 677889****************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MNYLRPDIKR GNIGPEEEDL IIRLHCLLGN RWSLIAGRLP GRTDNEIKNY WNTHLSKKLK 60 KHGFIPREET QRFKRSESSR KKKMTKIDNS NISTKQSAHE TAASDVDHDS KIYAPKPTRF 120 TPRLVRNCSV VESSEELGFD HGRLGMTGGP AAEEEKLSPA GSTHDDLLYF SALSDNAGEE 180 AENINLFDQQ QIDFPINDTV FERLFYEYSQ LLQAEVDFGQ MNDQFVY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 2e-31 | MYB family protein |