PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53339.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | Nin-like | ||||||||
Protein Properties | Length: 212aa MW: 23862.5 Da PI: 4.6187 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 81.6 | 8e-26 | 135 | 184 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ei +e++++yF++pi+ AA +++v+lTvLK++CR +GI+RWPhRk+ksl PKA53339.1 135 GEIGMEEIRAYFDMPITRAATKMNVGLTVLKKRCRDLGISRWPHRKMKSL 184 5899********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MEVDADQNSI FWHLFDEASA IDGGLMAFPD FLEEEGDYPL GCTDAAVPTF SSGSDELLPL 60 PDCLDYKAIP LSCLPQPPPE LRGMGNCSPE LEWDYVQCLA GPCTPQPELL MEYDHPGECR 120 LLESLPAKRR RSRSGEIGME EIRAYFDMPI TRAATKMNVG LTVLKKRCRD LGISRWPHRK 180 MKSLNTLIQN IQVFNFHARI LYVLSLSLSL LL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53040.1 | 8e-23 | Nin-like family protein |