PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53205.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | NF-YC | ||||||||
Protein Properties | Length: 129aa MW: 13886.8 Da PI: 9.7126 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 91.1 | 1e-28 | 19 | 108 | 16 | 98 |
NF-YC 16 fk.nhelPlarikkilk.....adedvkmisaeaPvllskacelfileltlrswlhae.enkrrtlkksdiaaavtrtdifdflvdivpr 98 +k +h+lPl+rikki+k ad+ mis eaP+++sk celfi elt rsw a krrtl + d+aaav+ td fdflv +v PKA53205.1 19 MKgQHALPLTRIKKIMKrsggqADQGKMMISVEAPIVFSKVCELFIEELTRRSWASAAaYGKRRTLVREDVAAAVEATDNFDFLVSVVSS 108 5559************955555588899**************************9875168************************99976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 129 aa Download sequence |
MRRPGIYSGV FTGGDASGMK GQHALPLTRI KKIMKRSGGQ ADQGKMMISV EAPIVFSKVC 60 ELFIEELTRR SWASAAAYGK RRTLVREDVA AAVEATDNFD FLVSVVSSSR RAAAGRSADD 120 DSDGVVMDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 1e-24 | NF-YC family protein |