PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53184.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 338aa MW: 37598.9 Da PI: 8.7543 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 30.2 | 5.6e-10 | 220 | 274 | 1 | 55 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55 lv++L++cAeav++++ e a+ +++++s la ++g++m++++ +ft ++ l+ PKA53184.1 220 LVHALMACAEAVQEENYEVADIIVNQISMLAPSQGSAMRKVVGFFTSCVSTVLQW 274 689*******************************************998887765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MRPADGGKDI TLNSHGALNF RLKEPALSKG LVTNPYLVDI LHSCMAAARE HVECGGGRDY 60 NPPAQSAVEW KGKMRGTQDE TDTGMDELLA ALGYKVKSSD MAEVAQKLEQ LEMAMGSSAA 120 PDDVLLNHLP PTPSTTILRI CPTGWRAWSP SSARRLHRCR QRRFTDPTAL ICRQPHSLHK 180 ADLEAACLLR RHRRSDVFQP PAASAKPVVM VDTQDAGIRL VHALMACAEA VQEENYEVAD 240 IIVNQISMLA PSQGSAMRKV VGFFTSCVST VLQWVAHAVR NYVIAEKRRR PPVGRTRRVT 300 AGPANGRMTS PVREDREERE RERFGEERER ERFGEERG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 3e-30 | GRAS family protein |