PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA53184.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 338aa    MW: 37598.9 Da    PI: 8.7543
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA53184.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS30.25.6e-10220274155
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar 55 
                 lv++L++cAeav++++ e a+ +++++s la ++g++m++++ +ft   ++ l+ 
  PKA53184.1 220 LVHALMACAEAVQEENYEVADIIVNQISMLAPSQGSAMRKVVGFFTSCVSTVLQW 274
                 689*******************************************998887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MRPADGGKDI TLNSHGALNF RLKEPALSKG LVTNPYLVDI LHSCMAAARE HVECGGGRDY  60
NPPAQSAVEW KGKMRGTQDE TDTGMDELLA ALGYKVKSSD MAEVAQKLEQ LEMAMGSSAA  120
PDDVLLNHLP PTPSTTILRI CPTGWRAWSP SSARRLHRCR QRRFTDPTAL ICRQPHSLHK  180
ADLEAACLLR RHRRSDVFQP PAASAKPVVM VDTQDAGIRL VHALMACAEA VQEENYEVAD  240
IIVNQISMLA PSQGSAMRKV VGFFTSCVST VLQWVAHAVR NYVIAEKRRR PPVGRTRRVT  300
AGPANGRMTS PVREDREERE RERFGEERER ERFGEERG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.13e-30GRAS family protein