PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA53140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB | ||||||||
Protein Properties | Length: 309aa MW: 33471.8 Da PI: 6.4102 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 62.3 | 9.6e-20 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+++++++G g+W++ +r g++R++k+c++rw +yl PKA53140.1 14 KGPWTPEEDQKLIQYIQKHGHGSWRALPRLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.7e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+++ +E++ +++++ lG++ W++Ia +++ gRt++++k++w+++l PKA53140.1 67 RGKFSSDEEQTILNLHSILGNK-WSAIATHLP-GRTDNEIKNFWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 309 aa Download sequence |
MGRSPCCDEN GLKKGPWTPE EDQKLIQYIQ KHGHGSWRAL PRLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SSDEEQTILN LHSILGNKWS AIATHLPGRT DNEIKNFWNT HLKKRLIQMG 120 FDPMTHRPRT DFFAALPHLL ALASLLDQHP ATLLDGLNAE ATRLQCLQYI LNSATAFGGG 180 GSSTAGGHAA DSLNVLPNPQ TFPSPIASFS TPGDTINLPE LQIPLSFDTV SFDLISNETS 240 SFSLLSPGDG TTPPLMVSPT SALPPLADLS NQGDACSTSS CGGSGNCSTP AASFWPDLLF 300 DDPFIPEFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34670.1 | 7e-91 | MYB family protein |