PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA53098.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 553aa MW: 62994.2 Da PI: 5.408

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA53098.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	184.2	3e-57	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv +yLk+k++g+k+el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nrat+sgyWkatgkd++v s ++ PKA53098.1 6 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EVIPEVDLYKCEPWDLPeKsFLPSKDLEWYFFSPRDRKYPNGSRTNRATQSGYWKATGKDRKVSS-QK 102 79**************************.99**********95334455777*********************************9.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++vg+kktLv+y+grap+g++tdWvmheyrl PKA53098.1 103 RAVGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133 99*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 553 aa Download sequence
MAPVTLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPEKSFLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATQSGYWK ATGKDRKVSS QKRAVGMKKT LVYYRGRAPH 120 GSRTDWVMHE YRLDERECES ATGLQDAYAL CRVFKKNAPG PKIVEHYGAP SEEQSQWLAN 180 EYCYYSSAAN PSDNPDGRGG GDGLENMSSH HFEAPLHSSE NSWMQFLAEE EFASDSNAPL 240 PDVPSSFCYL PSKADVAVEC ARLQKRFIMP PLEVEEFPQL NADDSKALHS RFCQLSTNGT 300 DIVQEILSVA SASQEPIHNI PSFHEEIWAL KSNTSYFNPC KLGEQSAFVD ISELEQEFKE 360 QKQVENRAEM NTEAQQGQHV ENTQGESHQG YEHCESVELD HRPIFSQPQE DDFIDIQQHE 420 IDQDETQDLD GACFDLYEKI EFSKGLLVSS QGTARTFFHQ TAELKKIDFH LNSTGFIVTR 480 IKHSSKDQVR ASFYGKFKEF ICSKIMGEKK NGEKNVWFPS SKGRGNSSIS LYGKWPFLSL 540 LASPLYASGL INV

Sequence ? help Back to Top

Protein Sequence Length: 553 aa Download sequence

MAPVTLPPGF RFHPTDEELV AYYLKRKING RKIELEVIPE VDLYKCEPWD LPEKSFLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATQSGYWK ATGKDRKVSS QKRAVGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECES ATGLQDAYAL CRVFKKNAPG PKIVEHYGAP SEEQSQWLAN  180
EYCYYSSAAN PSDNPDGRGG GDGLENMSSH HFEAPLHSSE NSWMQFLAEE EFASDSNAPL  240
PDVPSSFCYL PSKADVAVEC ARLQKRFIMP PLEVEEFPQL NADDSKALHS RFCQLSTNGT  300
DIVQEILSVA SASQEPIHNI PSFHEEIWAL KSNTSYFNPC KLGEQSAFVD ISELEQEFKE  360
QKQVENRAEM NTEAQQGQHV ENTQGESHQG YEHCESVELD HRPIFSQPQE DDFIDIQQHE  420
IDQDETQDLD GACFDLYEKI EFSKGLLVSS QGTARTFFHQ TAELKKIDFH LNSTGFIVTR  480
IKHSSKDQVR ASFYGKFKEF ICSKIMGEKK NGEKNVWFPS SKGRGNSSIS LYGKWPFLSL  540
LASPLYASGL INV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-126	NAC family protein