PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA53040.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 691aa MW: 77290.4 Da PI: 4.4873

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA53040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	172.6	1.2e-53	21	149	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 l+pGfrFhPtdeelv++yLk+kv+g+++++ ++++evd+ykvePwdLp+ ++++++ ewyfF++ d+ky++ +r+nrat++gyWk+tgkd++v + ++ PKA53040.1 21 LAPGFRFHPTDEELVSYYLKRKVTGQPIRV-DAVAEVDLYKVEPWDLPArsRLRSRDMEWYFFTSLDRKYSNRSRTNRATEEGYWKTTGKDRPVRC-RS 117 579*************************.99***********5347778899**********************************.99 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 ++vg+kktLv++ grap+g++t+Wvmheyrle PKA53040.1 118 RNVGMKKTLVYHAGRAPRGTRTNWVMHEYRLE 149 99**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MVKEISGSNV PPPPPPRSSH LAPGFRFHPT DEELVSYYLK RKVTGQPIRV DAVAEVDLYK 60 VEPWDLPARS RLRSRDMEWY FFTSLDRKYS NRSRTNRATE EGYWKTTGKD RPVRCRSRNV 120 GMKKTLVYHA GRAPRGTRTN WVMHEYRLED DDLSRAGNQQ DGHVLCRVFQ KSGPGPQNGA 180 QYGAPFVEEE WERDEEEETN IVPVNEDGDD ALVNPASPNY FHVGDFLQNQ ELSIQDVDDV 240 PLAANFGEQE IGSNAEDPSI SLDDILKDQC SVDDVPGDAD FLSIEDVSFF SKLKDENDLE 300 YLSKDQSRDN ACMPLDDSYF VGTSYISNEF PTSLPCKGED DPLDIVEKCN VIPGKYVVGN 360 TLDTEIGNQL DQLKKFPNTL NDKDLKSSVP PCHVPSEYSS CQLVDDNSLF YEAVNRDISF 420 LEAGLENETS LLPIADFDGV DDFIAYYDAM DNLHYAPLDS CQPEFKSVHS SSKVQPNPVG 480 YDILMAFPRF QALCIFFLNF IGLKWGYYDV LQVAGNSASC HVEADVQEGS EKYASLVMAP 540 NVPDPSSVFH GNLTTDVDLK DHCNKTITKR LANFLGSISA PPAFANEPCM MGKAAQISAA 600 SSGSFHVTAG WIRIQNMNSE NWMLHKDEKT HLLVSYGVDG SLVTKSLRDE PMTKSNAGLL 660 SLLFRGGFSL FFLSALMLVF SYKVGVFVYN L

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MVKEISGSNV PPPPPPRSSH LAPGFRFHPT DEELVSYYLK RKVTGQPIRV DAVAEVDLYK  60
VEPWDLPARS RLRSRDMEWY FFTSLDRKYS NRSRTNRATE EGYWKTTGKD RPVRCRSRNV  120
GMKKTLVYHA GRAPRGTRTN WVMHEYRLED DDLSRAGNQQ DGHVLCRVFQ KSGPGPQNGA  180
QYGAPFVEEE WERDEEEETN IVPVNEDGDD ALVNPASPNY FHVGDFLQNQ ELSIQDVDDV  240
PLAANFGEQE IGSNAEDPSI SLDDILKDQC SVDDVPGDAD FLSIEDVSFF SKLKDENDLE  300
YLSKDQSRDN ACMPLDDSYF VGTSYISNEF PTSLPCKGED DPLDIVEKCN VIPGKYVVGN  360
TLDTEIGNQL DQLKKFPNTL NDKDLKSSVP PCHVPSEYSS CQLVDDNSLF YEAVNRDISF  420
LEAGLENETS LLPIADFDGV DDFIAYYDAM DNLHYAPLDS CQPEFKSVHS SSKVQPNPVG  480
YDILMAFPRF QALCIFFLNF IGLKWGYYDV LQVAGNSASC HVEADVQEGS EKYASLVMAP  540
NVPDPSSVFH GNLTTDVDLK DHCNKTITKR LANFLGSISA PPAFANEPCM MGKAAQISAA  600
SSGSFHVTAG WIRIQNMNSE NWMLHKDEKT HLLVSYGVDG SLVTKSLRDE PMTKSNAGLL  660
SLLFRGGFSL FFLSALMLVF SYKVGVFVYN L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	7e-86	NAC family protein