PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA52809.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 421aa MW: 47544.1 Da PI: 7.1605 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 377.6 | 1.6e-115 | 29 | 397 | 2 | 370 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalkl.fsevsPilkfshlta 98 ++lL++cAe +++ dl +a+++++ ls +sp gd+ R+++ ft+AL+ ++ r +l + l ++ +++ +++e++++ l +++++P+l+f+hlta PKA52809.1 29 RQLLIRCAELIHHADLPAARRAISLLSAASSPFGDSADRIVHQFTRALSLQVDR--LSLQSPLsTSFPSAAGDTDEAIQSSYLhLNQITPFLRFAHLTA 125 689**************************************************9..4444444222233333466666655556*************** PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl......vakrledl 189 NqaIleav+g++r+Hi+Dfd s+G+QWp+Llqa+a+R+ ++pps+RiTg g + + l++t++rL+ fA++l++pf+f++l +++ ++ PKA52809.1 126 NQAILEAVDGHRRIHILDFDTSHGVQWPPLLQAIADRSdpSDPPSIRITGTGT----DMDVLRRTAHRLHFFANSLNLPFHFHPLlvpsslPTSAANST 220 *************************************97788***********....***************************986665444566777 PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvEre 288 ++ ++++++gE+laVn+v+ lh+l +++ + +++L+ ++ l+P vv+++e+ea+hns+ Fl+rf+eale+y+++f+slea+lp++s+er++vEr+ PKA52809.1 221 SFASFQLHSGETLAVNCVFFLHKLIKNEPDCYRDVRSFLRSIRALNPAVVTMAEREASHNSPAFLQRFIEALEHYTVVFESLEATLPPTSRERMVVERV 319 899999999*****************99999999***************************************************************** PP GRAS 289 llgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370 +lgrei vva e + e++ekW+e++++aG++++pls +a++qa+lllr ++ s+gy+++ ++s +lgW+++pL+sv PKA52809.1 320 WLGREIAAVVAGEDRF-----ERFEKWEEMMRAAGLTAAPLSPFAVSQARLLLRLHYpSEGYQLQVVRDSCFLGWQTKPLFSV 397 **********987664.....8899*******************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 421 aa Download sequence |
MLSSLNSREE GEQDPHPLRR CSSPYPSPRQ LLIRCAELIH HADLPAARRA ISLLSAASSP 60 FGDSADRIVH QFTRALSLQV DRLSLQSPLS TSFPSAAGDT DEAIQSSYLH LNQITPFLRF 120 AHLTANQAIL EAVDGHRRIH ILDFDTSHGV QWPPLLQAIA DRSDPSDPPS IRITGTGTDM 180 DVLRRTAHRL HFFANSLNLP FHFHPLLVPS SLPTSAANST SFASFQLHSG ETLAVNCVFF 240 LHKLIKNEPD CYRDVRSFLR SIRALNPAVV TMAEREASHN SPAFLQRFIE ALEHYTVVFE 300 SLEATLPPTS RERMVVERVW LGREIAAVVA GEDRFERFEK WEEMMRAAGL TAAPLSPFAV 360 SQARLLLRLH YPSEGYQLQV VRDSCFLGWQ TKPLFSVEQF NKPNILKQWE ELVRRESMKR 420 D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55580.1 | 1e-107 | GRAS family protein |