PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA52788.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | C2H2 | ||||||||
Protein Properties | Length: 222aa MW: 23753.1 Da PI: 8.5808 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.7 | 0.00083 | 80 | 102 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+k+F++ L H +H PKA52788.1 80 YECKTCSKCFPSFQALGGHRASH 102 99**********99999998887 PP | |||||||
2 | zf-C2H2 | 11.5 | 0.00094 | 136 | 156 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg F++ L H+r+H PKA52788.1 136 CSVCGLEFPSGQALGGHMRRH 156 ********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MEAAHEEPMG SYTTTSTCDS PSPVVLKRRR TIRHRAVAVA SPASSVELSG MTEDEDDDLA 60 ANCLILLAQG RDLEAASEFY ECKTCSKCFP SFQALGGHRA SHKKPKQASQ WQPSLPSSYL 120 VHGGGSGGGK QRIHGCSVCG LEFPSGQALG GHMRRHRPAI LPEVSGKKKE KKKKQKKNVL 180 SLDLNLPAPS DDVDPFAMAG LPLSFSSAPP QPPPPPLVGC HY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 1e-30 | C2H2 family protein |