PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA52541.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family ERF
Protein Properties Length: 303aa    MW: 33064.3 Da    PI: 9.7404
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA52541.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.2e-1676126155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +++ GVr+++ +grWvAeI+d +   ++ r +lg+f tae Aa a+++a+  l+g
  PKA52541.1  76 TKFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEAAACAYDEAACLLRG 126
                 699*******.7*********32...35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MKTNPPTSSS LYILSSYPNI IKPLNNSSSS SSSSLHSLTN PMEQTKLAAN PTTKFKPKPK  60
TISGGPSAAS ATTAVTKFVG VRQRPSGRWV AEIKDTTQKI RMWLGTFETA EAAACAYDEA  120
ACLLRGANTR TNFTASRPQA SAAGDSPLAI RIRKLLNHKK LSGYPTPVST SPRAAFIPPT  180
SADRGSTSTT SNSGKSIGVK QESPELYRPC FCSEFARQGS PAPEHSWVFD TITMFDTIEM  240
NKQVSPPQPA EVSEFERMKV ERQISASLYA TTGVQEYFDA VKEVSPPSDQ MWELPQLYQF  300
YKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-26ERF family protein