PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA52524.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | HB-other | ||||||||
Protein Properties | Length: 151aa MW: 17308.3 Da PI: 10.549 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 44.7 | 2.2e-14 | 77 | 120 | 13 | 56 |
HHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 13 eeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++L e+Fe+n+yps+e++e LA++lg+ qV WF N R + + PKA52524.1 77 KQLHEAFEENPYPSREKKESLAQELGMAFHQVNKWFDNMRSRSR 120 689***************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MGTRGCRYAA VWRKFGVNSE VDKWFSNARH GFRAYEKESS NAGHSMPVKQ TEKKSPGGSI 60 RNKQRVSIHR CANLVNKQLH EAFEENPYPS REKKESLAQE LGMAFHQVNK WFDNMRSRSR 120 TSSDKSISQA SSFQISRLDS MQFDKSLETA S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 3e-07 | HB-PHD family protein |