PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA52337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 1361aa MW: 150588 Da PI: 7.9191 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 158.4 | 6.2e-49 | 131 | 499 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvsel.....ykalppsetseknsseelaalkl...fsevsPilk 92 ++lL A av++ + +++q+lL l+elasp+gd+++Rla+y ++AL +r +++++ + ++al + +++++ s+e ++++ f+evsP++ PKA52337.1 131 EQLLNPLAAAVEAVNVSRIQHLLYVLQELASPAGDANHRLAFYGLQALTRRFSSTGHAIpcgspAAALFAVPQPTYASTEPKLFRSAlikFHEVSPWFA 229 689999***********************************************9766553222223343334444444444444444578********* PP GRAS 93 fshltaNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg......skeeleetgerLakfAeelgvpfefnvl 181 f + +aN aIl+a++ + +H++D ++s+GlQWp+Ll+aL+ Rp +p + iT+ g++ + + ++ L ++A++++++++ + PKA52337.1 230 FPNCLANAAILQAAAAWragRGLHVVDVGVSHGLQWPTLLEALTRRPTAAPtVVTITVAGEELAPakgifeAAPPGYDYAPHLLRYAKSIELNLRVEK- 327 *************9987666789************************7766599*****99654467788888889999***********99998886. PP GRAS 182 vakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe...adhnsesFlerflealeyysalfdsleakl.p 276 e+ + +E l+V+ +++l r e+L+ v+++ P+++vv+e ++ F e+f+++ e+ + +++s+++ + + PKA52337.1 328 ---------GEKVERVGKEILVVCAQFRLGRAG----------AEFLRKVREMDPDLLVVSEMAdgfGGEGGLGFCEGFARKTEVLWRFLESTSVAFkG 407 .........455566689*********999997..........47*****************983433346669*******************777614 PP GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee.....sgslvlgWkdrpLvs 369 res+er++vE e + v+ e ++Wre++ee GF++ ++e+a + + llrk++ ++++rv g + l Wk++ + + PKA52337.1 408 RESDERRVVEGE-----AARVLEEEDGV-------RRRWREKMEEEGFNEEGFGEEALEAGRGLLRKYDgGWEMRVAAAaagggGGGVGLWWKGQIVSF 494 555666666655.....66666665554.......578*******************************99999999776777445555********** PP GRAS 370 vSaWr 374 +S Wr PKA52337.1 495 CSIWR 499 ****8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1361 aa Download sequence |
MDWLEDSISF LPTFLSEPYA VPDELARYEW WAQDQSPTPP HLQPSPAAAV AAVKPEPPTE 60 TPKSDFSRKR RLQANPASNT HRRKTEPHHR DEEEDRDLKP HVAGGKKGSG KGTSGGASSG 120 GSSGKEARWA EQLLNPLAAA VEAVNVSRIQ HLLYVLQELA SPAGDANHRL AFYGLQALTR 180 RFSSTGHAIP CGSPAAALFA VPQPTYASTE PKLFRSALIK FHEVSPWFAF PNCLANAAIL 240 QAAAAWRAGR GLHVVDVGVS HGLQWPTLLE ALTRRPTAAP TVVTITVAGE ELAPAKGIFE 300 AAPPGYDYAP HLLRYAKSIE LNLRVEKGEK VERVGKEILV VCAQFRLGRA GAEFLRKVRE 360 MDPDLLVVSE MADGFGGEGG LGFCEGFARK TEVLWRFLES TSVAFKGRES DERRVVEGEA 420 ARVLEEEDGV RRRWREKMEE EGFNEEGFGE EALEAGRGLL RKYDGGWEMR VAAAAAGGGG 480 GGVGLWWKGQ IVSFCSIWRP VLRPTPTNAA GGATGTLTHY SRRDRQITSL GRPGVHSPSR 540 ALKLCAAELR DRQHKSSFSY IRSILGIKDS QVEASEKDMD AEQEKEWLEA QNISISDDLV 600 PLALKQLEFL AAVDKRRFLY GGPILERAIR RYKTCWLPLL AWFTKSAHLE GSLVVPFDCE 660 WIWHCHRLNP VQYHRDCMEF YGRTLDCKNV QSSLQASSEN LTAGKWAKFY RDEPFELDYS 720 SPSAESKCNP HTETSSTFTY DLASAVKRQS SFYYQVCRPV MHDKRFLEGA VARYKGFLHL 780 IKRNRESSTR CFCVPTYDVD LIWHSHQLQP LSYQKDMIEL IGKILEHDDT DSDRTKGQKL 840 DVGFSETTKQ WEDTYGLRYW RAGAMYRGAA PALSVATPLL SSYDSSTPLS VCRPPISIPL 900 QRKMMVEVLL EIVGIRGLPS DHREDVFVSF GKNKPDAFLS GRCHLGISSE TGEKRVASFQ 960 CESTGVLILS VMTKSKLAKT IGTISISLEK LMDPNSNLSI EKWFDLKSHS RNANSKQIYL 1020 RVAASFTVPV PAPYVFEMVK LRPFLMNSCM FPVRNTTQLM RNCTQFIDYC GNDVITLQMR 1080 RSKEGGGSKN SLWKQRIVGI TRLSRKPSCL AYFAENTWFF NELNLSLNVD MNANQGSYEL 1140 ELKGFRQTKL LPGRKLEYYQ PRNNMPDEAD NCLTVAEFSA EYPYGKALAL FDLKSGVVKV 1200 HLFVPYKELH LYFEKHCPIF LFLPYKQISD DWFVLPATLI AFIISDLLKR GNNITFSPIF 1260 TNSVPNRRVG DPVGYDKNET SGKAVDSGSC SSGCNGGCGS GYAENSSSCG GDCGSAVQGS 1320 KGGEGSNGGG ACDAGGCGSC GSAAGGNEAN HVSSKETLVG A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13840.1 | 2e-63 | GRAS family protein |