PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA51964.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 637aa MW: 71307.7 Da PI: 6.0266 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 347 | 3e-106 | 253 | 629 | 4 | 374 |
GRAS 4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102 lLl+c eavs++ l++a+ lLa++++++s++gd++qRla++f+++L+arl++ + + +++ +++ l+a++l++ ++P+ k+s + +N+ + PKA51964.1 253 LLLQCSEAVSQNMLRRAHDLLAEIRQRSSSSGDANQRLAHCFANGLEARLTGRADCAGTRAYFFTGARTAMADMLKAYQLYVAACPFKKISDFFTNHYV 351 89**************************************************888888888888888899***************************** PP GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199 l+ ++ ++HiiDf+is+G+ Wp+++q L++ p+g+p lRiTg++ +++g + +e+tg+rLa++A+++++pf++++ +a ++e+l++ +++++ + PKA51964.1 352 LNISRKKAKLHIIDFGISHGFTWPCFMQRLSTLPGGSPALRITGIEVSQPGfrPAAWVEATGRRLADYARRFNIPFQYTP-IACNWESLRVADFNLDDD 449 ***********************************************999999999************************.6999************** PP GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.....eerikvErellgre 293 EalaV ++ +lh+l de+vs e +rd+vL ++++l+P+v+v+ + ++ + F++rf eal ++sa+ d+le++lpre+ e+r+++E++l++re PKA51964.1 450 EALAVTCMNRLHNLADETVSPECPRDQVLTTIRELNPDVFVLGIVNGTYGVPFFATRFREALFHFSAVVDMLETNLPRENviqqeEQRRMLEKHLVERE 548 *******************************************************************************99999999************ PP GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 ++nvvaceg+e++er et+++Wr r+e+aG++ ++l+ ++++ a++ + ++ + + ++e+ ++l++gWk+r+L ++SaWr PKA51964.1 549 VMNVVACEGTEKVERPETYRQWRGRVERAGMEMAALDGEVVAAARRKVGGCYHKDFLIDEDGKWLLQGWKGRTLHALSAWR 629 ****************************************************888*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 637 aa Download sequence |
MANDFLLKDF YSDQLFMTFS SPNLNQRSIV NFSGGANPPA PVFTSATGVH GGSSHEDSDV 60 FSDIVLSYIN QMLMEEDGEK NLDLPQEHPA LLAAEKPFYD ILADTQSSSS SEHSLISPQE 120 RTPVSGVATC DIPEGLPVQQ LNVVVEEAKK FLPNLENLII GVAAGGPTPP EDGPFTPPKI 180 RKNFHGDDDF DLETGEGRRA KQSALFVDSD VPPEMFDVLL CKDSLKSRET SGDSRKTRQK 240 RQQRKESPDL SFLLLQCSEA VSQNMLRRAH DLLAEIRQRS SSSGDANQRL AHCFANGLEA 300 RLTGRADCAG TRAYFFTGAR TAMADMLKAY QLYVAACPFK KISDFFTNHY VLNISRKKAK 360 LHIIDFGISH GFTWPCFMQR LSTLPGGSPA LRITGIEVSQ PGFRPAAWVE ATGRRLADYA 420 RRFNIPFQYT PIACNWESLR VADFNLDDDE ALAVTCMNRL HNLADETVSP ECPRDQVLTT 480 IRELNPDVFV LGIVNGTYGV PFFATRFREA LFHFSAVVDM LETNLPRENV IQQEEQRRML 540 EKHLVEREVM NVVACEGTEK VERPETYRQW RGRVERAGME MAALDGEVVA AARRKVGGCY 600 HKDFLIDEDG KWLLQGWKGR TLHALSAWRP RQGKQSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G29060.1 | 1e-136 | GRAS family protein |