PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51964.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 637aa    MW: 71307.7 Da    PI: 6.0266
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3473e-1062536294374
        GRAS   4 lLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqaI 102
                 lLl+c eavs++ l++a+ lLa++++++s++gd++qRla++f+++L+arl++  +         + +++ +++ l+a++l++ ++P+ k+s + +N+ +
  PKA51964.1 253 LLLQCSEAVSQNMLRRAHDLLAEIRQRSSSSGDANQRLAHCFANGLEARLTGRADCAGTRAYFFTGARTAMADMLKAYQLYVAACPFKKISDFFTNHYV 351
                 89**************************************************888888888888888899***************************** PP

        GRAS 103 leavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 l+   ++ ++HiiDf+is+G+ Wp+++q L++ p+g+p lRiTg++ +++g   +  +e+tg+rLa++A+++++pf++++ +a ++e+l++ +++++ +
  PKA51964.1 352 LNISRKKAKLHIIDFGISHGFTWPCFMQRLSTLPGGSPALRITGIEVSQPGfrPAAWVEATGRRLADYARRFNIPFQYTP-IACNWESLRVADFNLDDD 449
                 ***********************************************999999999************************.6999************** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.....eerikvErellgre 293
                 EalaV ++ +lh+l de+vs e +rd+vL ++++l+P+v+v+   +  ++ + F++rf eal ++sa+ d+le++lpre+     e+r+++E++l++re
  PKA51964.1 450 EALAVTCMNRLHNLADETVSPECPRDQVLTTIRELNPDVFVLGIVNGTYGVPFFATRFREALFHFSAVVDMLETNLPRENviqqeEQRRMLEKHLVERE 548
                 *******************************************************************************99999999************ PP

        GRAS 294 ivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++nvvaceg+e++er et+++Wr r+e+aG++ ++l+ ++++ a++ +  ++ + + ++e+ ++l++gWk+r+L ++SaWr
  PKA51964.1 549 VMNVVACEGTEKVERPETYRQWRGRVERAGMEMAALDGEVVAAARRKVGGCYHKDFLIDEDGKWLLQGWKGRTLHALSAWR 629
                 ****************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    
MANDFLLKDF YSDQLFMTFS SPNLNQRSIV NFSGGANPPA PVFTSATGVH GGSSHEDSDV  60
FSDIVLSYIN QMLMEEDGEK NLDLPQEHPA LLAAEKPFYD ILADTQSSSS SEHSLISPQE  120
RTPVSGVATC DIPEGLPVQQ LNVVVEEAKK FLPNLENLII GVAAGGPTPP EDGPFTPPKI  180
RKNFHGDDDF DLETGEGRRA KQSALFVDSD VPPEMFDVLL CKDSLKSRET SGDSRKTRQK  240
RQQRKESPDL SFLLLQCSEA VSQNMLRRAH DLLAEIRQRS SSSGDANQRL AHCFANGLEA  300
RLTGRADCAG TRAYFFTGAR TAMADMLKAY QLYVAACPFK KISDFFTNHY VLNISRKKAK  360
LHIIDFGISH GFTWPCFMQR LSTLPGGSPA LRITGIEVSQ PGFRPAAWVE ATGRRLADYA  420
RRFNIPFQYT PIACNWESLR VADFNLDDDE ALAVTCMNRL HNLADETVSP ECPRDQVLTT  480
IRELNPDVFV LGIVNGTYGV PFFATRFREA LFHFSAVVDM LETNLPRENV IQQEEQRRML  540
EKHLVEREVM NVVACEGTEK VERPETYRQW RGRVERAGME MAALDGEVVA AARRKVGGCY  600
HKDFLIDEDG KWLLQGWKGR TLHALSAWRP RQGKQSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.11e-136GRAS family protein