PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA51827.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 693aa MW: 74553.3 Da PI: 6.2658 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 406 | 3.7e-124 | 314 | 675 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfshlta 98 +lLl+cAeav++++le+a++lL ++sel++p g++ qR+aayf eA++arl++s+ ++y+ lp+ + + + ++a+++f+ +sP++kfsh+ta PKA51827.1 314 LTLLLQCAEAVAADNLEEANRLLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPAIAGGIGSahRNRLASAFQVFNGISPFVKFSHFTA 412 579************************************************************888765443348888999****************** PP GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197 NqaI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+gs s e+l++tg+rL++fAe+lg+pfef + +a+++ +l++++Lr++ PKA51827.1 413 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGS----SVEALQATGKRLSDFAETLGLPFEFCA-IAEKVGNLDPDRLRIS 506 ***************************************************....9**************************.7*************** PP GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296 ++EalaV++ + h+l+d ++s ++ +L+l+++l Pkvv++veq+++ ++sFl+rf+ea++yysalfdsl a+++++s+er+ vE++ll+rei+n PKA51827.1 507 RREALAVHWLH--HSLYDVTGSDTN----TLWLLQRLAPKVVTMVEQDLSQ-AGSFLARFVEAIHYYSALFDSLGASYGEDSHERHIVEQQLLSREIRN 598 **********9..999999999999....********************98.899******************************************** PP GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 v+a g +r + + +++Wre+l+++GF+ v+l +a +qa lll +++ dgy++ ee+g+l lgWkd L+++SaW+ PKA51827.1 599 VLAVGGPARSGEVK-FGNWREKLSQSGFRGVSLAGNAHAQATLLLGMFPCDGYTLMEENGTLKLGWKDLCLLTASAWK 675 ********888776.**************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 693 aa Download sequence |
MASTSFLILP PPHDPSSINP SQEDPFFFLF PDPSSPPLPP FPSPSTSQAK RSMARKRPAS 60 ELDLQHDAAS SSYHHPARLP RRQPPASFSA SDQLHHPPLL SDLPPALLPS LPLPEPAPPA 120 VCGFSGLPLF SSEVDRSAAG HQNSETAVAA DEAGSGATAW IDGIIRDLLS SAAAEVSIHQ 180 IIQNVREVIY PCNPSLAAVL EFRLRSLTSD QAPTQLRAVP IPPTAAGAAG ESAEKSRREL 240 RASTELPCVS IYPRLPQSAA LQPAQQQQRS SASASSEEAS ATPAPSAPPP TAAARERKEE 300 LRQKKRDEEG LHLLTLLLQC AEAVAADNLE EANRLLLEIS ELSTPFGTSA QRVAAYFSEA 360 MSARLVSSCL GIYAPLPAIA GGIGSAHRNR LASAFQVFNG ISPFVKFSHF TANQAIQEAF 420 EREDRVHIID LDIMQGLQWP GLFHILASRP GGPPRVRLTG LGSSVEALQA TGKRLSDFAE 480 TLGLPFEFCA IAEKVGNLDP DRLRISRREA LAVHWLHHSL YDVTGSDTNT LWLLQRLAPK 540 VVTMVEQDLS QAGSFLARFV EAIHYYSALF DSLGASYGED SHERHIVEQQ LLSREIRNVL 600 AVGGPARSGE VKFGNWREKL SQSGFRGVSL AGNAHAQATL LLGMFPCDGY TLMEENGTLK 660 LGWKDLCLLT ASAWKPMQTA APVIAGDGGY SGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54220.1 | 0.0 | GRAS family protein |