PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51827.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 693aa    MW: 74553.3 Da    PI: 6.2658
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4063.7e-1243146752374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfshlta 98 
                  +lLl+cAeav++++le+a++lL ++sel++p g++ qR+aayf eA++arl++s+ ++y+ lp+ +    +    + ++a+++f+ +sP++kfsh+ta
  PKA51827.1 314 LTLLLQCAEAVAADNLEEANRLLLEISELSTPFGTSAQRVAAYFSEAMSARLVSSCLGIYAPLPAIAGGIGSahRNRLASAFQVFNGISPFVKFSHFTA 412
                 579************************************************************888765443348888999****************** PP

        GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 NqaI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+gs    s e+l++tg+rL++fAe+lg+pfef + +a+++ +l++++Lr++
  PKA51827.1 413 NQAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGS----SVEALQATGKRLSDFAETLGLPFEFCA-IAEKVGNLDPDRLRIS 506
                 ***************************************************....9**************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++EalaV++ +  h+l+d ++s ++    +L+l+++l Pkvv++veq+++  ++sFl+rf+ea++yysalfdsl a+++++s+er+ vE++ll+rei+n
  PKA51827.1 507 RREALAVHWLH--HSLYDVTGSDTN----TLWLLQRLAPKVVTMVEQDLSQ-AGSFLARFVEAIHYYSALFDSLGASYGEDSHERHIVEQQLLSREIRN 598
                 **********9..999999999999....********************98.899******************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 v+a  g +r  + + +++Wre+l+++GF+ v+l  +a +qa lll +++ dgy++ ee+g+l lgWkd  L+++SaW+
  PKA51827.1 599 VLAVGGPARSGEVK-FGNWREKLSQSGFRGVSLAGNAHAQATLLLGMFPCDGYTLMEENGTLKLGWKDLCLLTASAWK 675
                 ********888776.**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 693 aa     Download sequence    
MASTSFLILP PPHDPSSINP SQEDPFFFLF PDPSSPPLPP FPSPSTSQAK RSMARKRPAS  60
ELDLQHDAAS SSYHHPARLP RRQPPASFSA SDQLHHPPLL SDLPPALLPS LPLPEPAPPA  120
VCGFSGLPLF SSEVDRSAAG HQNSETAVAA DEAGSGATAW IDGIIRDLLS SAAAEVSIHQ  180
IIQNVREVIY PCNPSLAAVL EFRLRSLTSD QAPTQLRAVP IPPTAAGAAG ESAEKSRREL  240
RASTELPCVS IYPRLPQSAA LQPAQQQQRS SASASSEEAS ATPAPSAPPP TAAARERKEE  300
LRQKKRDEEG LHLLTLLLQC AEAVAADNLE EANRLLLEIS ELSTPFGTSA QRVAAYFSEA  360
MSARLVSSCL GIYAPLPAIA GGIGSAHRNR LASAFQVFNG ISPFVKFSHF TANQAIQEAF  420
EREDRVHIID LDIMQGLQWP GLFHILASRP GGPPRVRLTG LGSSVEALQA TGKRLSDFAE  480
TLGLPFEFCA IAEKVGNLDP DRLRISRREA LAVHWLHHSL YDVTGSDTNT LWLLQRLAPK  540
VVTMVEQDLS QAGSFLARFV EAIHYYSALF DSLGASYGED SHERHIVEQQ LLSREIRNVL  600
AVGGPARSGE VKFGNWREKL SQSGFRGVSL AGNAHAQATL LLGMFPCDGY TLMEENGTLK  660
LGWKDLCLLT ASAWKPMQTA APVIAGDGGY SGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein