PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51815.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

NAC

Protein Properties

Length: 316aa MW: 35633.3 Da PI: 9.2415

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	175.7	1.3e-54	8	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 lppGfrFhPtdeel+ +yL k++++ ++++ +i+evdiyk++PwdLp+k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+++sk++e PKA51815.1 8 LPPGFRFHPTDEELILHYLYKRATSAPCPV-AIIAEVDIYKFNPWDLPAKAMFGEREWYFFSPRDRKYPNGVRPNRAAASGYWKATGTDKPITSKSNER 105 79**************************.88***********8878899**************************************** PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +g+kk Lvfykgr pkg+kt+W+mheyrl PKA51815.1 106 IGVKKALVFYKGRPPKGTKTNWIMHEYRL 134 *************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MTTSSPPLPP GFRFHPTDEE LILHYLYKRA TSAPCPVAII AEVDIYKFNP WDLPAKAMFG 60 EREWYFFSPR DRKYPNGVRP NRAAASGYWK ATGTDKPITS KSNERIGVKK ALVFYKGRPP 120 KGTKTNWIMH EYRLAASLNC KQPLREGSMR LDDWVLCRIY QKTSHQSLIN REQQDSGGEE 180 AELQNSEKMN KMHKSFSLSE FLIEEADLSL LSKLLDTPPP PTIAGNPDPV PFNSSNTNQS 240 HSQAKQIERS ALFAAEGGLK RQRTAENCSS DELGGHQAPP KKLNTSTIYA QFSNPFDISH 300 PFVSQQLLLN SHLGMH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	3e-89	NAC family protein