PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51783.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family bHLH
Protein Properties Length: 278aa    MW: 30013.1 Da    PI: 7.9087
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.13.7e-14103149354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L +++e++k L
  PKA51783.1 103 KSHCEAERRRRERINGHLARLRSLLPST-----TKTDKASLLAEVIEHVKAL 149
                 78*************************9.....8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MDRSDEDGVS SSQTDGDLAR AENGLVSQSP ANGPPALWWQ TVVPAAHRHS PFRLQVEQER  60
FFPSLPPPPF CGYIYSTQAP PFARCQSMGP QITVDAKTLA ASKSHCEAER RRRERINGHL  120
ARLRSLLPST TKTDKASLLA EVIEHVKALK RQTSVITGES PLPTEADELT VDAAAEDDGR  180
LVITASLCCD DRPGLLPELI RALKSLRLRA LKAEITTLAG RVKNVLVITA VDGGYPYHRQ  240
PSVAAVQDLL KSVMERTAPA ADDPAAAAGG IKQQRTAA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109114ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.11e-49bHLH family protein