PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51635.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TCP

Protein Properties

Length: 282aa MW: 30400.9 Da PI: 6.5148

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115	9.7e-36	18	103	1	88
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssaseceaesssssasnsssg 88 +ag+kdrhsk++T++g+RdRR Rlsa++a++f+d+qd+LGfd++sk+++WL+++ak+ai+el+++ + +sss+a n++ + PKA51635.1 18 PAGRKDRHSKVSTAKGPRDRRLRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKNAKTAIDELAELppwhptaaG----------ASSSAAVNPNTA 103 589**************************************************************555443331..........111111111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MRGSGEIVEV HGSHIVRPAG RKDRHSKVST AKGPRDRRLR LSAHTAIQFY DVQDRLGFDR 60 PSKAVDWLIK NAKTAIDELA ELPPWHPTAA GASSSAAVNP NTASEKPMPA AEPTGFLPLS 120 LDSDAVAESI KSFFPMMSGA GAAAPAASSD LSSGNQNLRL SLQSFQDPIF PQNPAASGFH 180 QAVFSERTQT MASWNLAGEY ELNMPAPAFH PVVFAQRGTL QSSISPFFRP WTAPIDHEMQ 240 ETTHPAASSF VFASNGGGFP EFRIPARIQG EDDEHDGISN KL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	3e-67	TCP family protein