PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA51612.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 531aa MW: 57036.4 Da PI: 5.1412 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 401.1 | 1.1e-122 | 127 | 492 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 l++lL++ A+av+ gd+ la+al+ ++l + +++ m ++a yf+ AL r+++ ++ ++ + +++ ++ ++ f+e++P+lkf+h+t PKA51612.1 127 LIHLLMASATAVHRGDAGLASALIDDTRHLltCVSNAFGMGKVAGYFADALYLRIFS--PQSAA---VLSSP---AVDD-ILYHNFYEACPYLKFAHFT 216 689***************************777777789******************..32222...22222...3344.45689************** PP GRAS 98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196 aNqaIlea++ge+rvH+iDf++++GlQWpaL+qaLa Rp+gpp lRiTgvg+p ++ +++l+e+g +La++A++++v+f f+ ++a rl+d+++++L+v PKA51612.1 217 ANQAILEAFDGEDRVHVIDFNLMHGLQWPALIQALALRPGGPPALRITGVGPPYPDGRDNLREVGLQLANLAQSVKVRFAFRGVAAARLSDVRPWMLQV 315 ***********************************************************************************9999************ PP GRAS 197 kpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294 gEa+aVn+++q hrll ++ + + ++d+vL+ v +l+Pk+++vveqeadhn++ Fl+rf+eal yys+lfdslea+ ++ + ++ v +++l+re PKA51612.1 316 AVGEAVAVNSIFQFHRLLGDPDEAAPaPIDSVLSWVAGLRPKILTVVEQEADHNRPGFLDRFTEALFYYSTLFDSLEAG-GAGVSGDAAVAEVYLQREM 413 ******************9987776669***************************************************.66667777888888***** PP GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373 +nvv+ceg++r+erhe l++W rl++aG+kpv+l+++a kqa++ll+ ++++gy vee +g+l+lgW++rpL+s+S+W PKA51612.1 414 CNVVCCEGSARVERHEPLARWAVRLGRAGLKPVHLGSSAFKQANMLLSLFSGEGYCVEEVDGCLTLGWHSRPLISASSW 492 ******************************************************************************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 531 aa Download sequence |
MGHYQHSHSP ADWSASGVAD FDRLLAGAGY RVRSSDPQHL AQGLEQLDSA AAGADDCESS 60 PPLIPCDTVH YNHPSDLTAW VDSILSDLTS AALPHPPHPP PATWIATVYS PGIHCTLEDQ 120 EDAGIRLIHL LMASATAVHR GDAGLASALI DDTRHLLTCV SNAFGMGKVA GYFADALYLR 180 IFSPQSAAVL SSPAVDDILY HNFYEACPYL KFAHFTANQA ILEAFDGEDR VHVIDFNLMH 240 GLQWPALIQA LALRPGGPPA LRITGVGPPY PDGRDNLREV GLQLANLAQS VKVRFAFRGV 300 AAARLSDVRP WMLQVAVGEA VAVNSIFQFH RLLGDPDEAA PAPIDSVLSW VAGLRPKILT 360 VVEQEADHNR PGFLDRFTEA LFYYSTLFDS LEAGGAGVSG DAAVAEVYLQ REMCNVVCCE 420 GSARVERHEP LARWAVRLGR AGLKPVHLGS SAFKQANMLL SLFSGEGYCV EEVDGCLTLG 480 WHSRPLISAS SWCSGDHVPS PETMTTSCIL AGSNVINVKS DEVNYVSGSA V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14920.1 | 1e-140 | GRAS family protein |