PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA51612.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 531aa    MW: 57036.4 Da    PI: 5.1412
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA51612.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS401.11.1e-1221274921373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlsel..aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                 l++lL++ A+av+ gd+ la+al+   ++l  + +++  m ++a yf+ AL  r+++  ++ ++   + +++    ++    ++ f+e++P+lkf+h+t
  PKA51612.1 127 LIHLLMASATAVHRGDAGLASALIDDTRHLltCVSNAFGMGKVAGYFADALYLRIFS--PQSAA---VLSSP---AVDD-ILYHNFYEACPYLKFAHFT 216
                 689***************************777777789******************..32222...22222...3344.45689************** PP

        GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 aNqaIlea++ge+rvH+iDf++++GlQWpaL+qaLa Rp+gpp lRiTgvg+p ++ +++l+e+g +La++A++++v+f f+ ++a rl+d+++++L+v
  PKA51612.1 217 ANQAILEAFDGEDRVHVIDFNLMHGLQWPALIQALALRPGGPPALRITGVGPPYPDGRDNLREVGLQLANLAQSVKVRFAFRGVAAARLSDVRPWMLQV 315
                 ***********************************************************************************9999************ PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsles.erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                   gEa+aVn+++q hrll ++ + +  ++d+vL+ v +l+Pk+++vveqeadhn++ Fl+rf+eal yys+lfdslea+ ++  + ++ v +++l+re 
  PKA51612.1 316 AVGEAVAVNSIFQFHRLLGDPDEAAPaPIDSVLSWVAGLRPKILTVVEQEADHNRPGFLDRFTEALFYYSTLFDSLEAG-GAGVSGDAAVAEVYLQREM 413
                 ******************9987776669***************************************************.66667777888888***** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 +nvv+ceg++r+erhe l++W  rl++aG+kpv+l+++a kqa++ll+ ++++gy vee +g+l+lgW++rpL+s+S+W
  PKA51612.1 414 CNVVCCEGSARVERHEPLARWAVRLGRAGLKPVHLGSSAFKQANMLLSLFSGEGYCVEEVDGCLTLGWHSRPLISASSW 492
                 ******************************************************************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    
MGHYQHSHSP ADWSASGVAD FDRLLAGAGY RVRSSDPQHL AQGLEQLDSA AAGADDCESS  60
PPLIPCDTVH YNHPSDLTAW VDSILSDLTS AALPHPPHPP PATWIATVYS PGIHCTLEDQ  120
EDAGIRLIHL LMASATAVHR GDAGLASALI DDTRHLLTCV SNAFGMGKVA GYFADALYLR  180
IFSPQSAAVL SSPAVDDILY HNFYEACPYL KFAHFTANQA ILEAFDGEDR VHVIDFNLMH  240
GLQWPALIQA LALRPGGPPA LRITGVGPPY PDGRDNLREV GLQLANLAQS VKVRFAFRGV  300
AAARLSDVRP WMLQVAVGEA VAVNSIFQFH RLLGDPDEAA PAPIDSVLSW VAGLRPKILT  360
VVEQEADHNR PGFLDRFTEA LFYYSTLFDS LEAGGAGVSG DAAVAEVYLQ REMCNVVCCE  420
GSARVERHEP LARWAVRLGR AGLKPVHLGS SAFKQANMLL SLFSGEGYCV EEVDGCLTLG  480
WHSRPLISAS SWCSGDHVPS PETMTTSCIL AGSNVINVKS DEVNYVSGSA V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-140GRAS family protein