PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA51484.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | E2F/DP | ||||||||
Protein Properties | Length: 380aa MW: 42249.6 Da PI: 9.0085 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 73.2 | 2.8e-23 | 16 | 81 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f++l+++++ ++v l+++a +L v +rRRiYDi+NV+e+++++++k+kn++ w+g PKA51484.1 16 RKQKSLGLLCSNFVALYNREDVETVGLDDAAVKL---GV--ERRRIYDIVNVMESVGVLTRKAKNRYLWIG 81 79****************9999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 79 | 4.4e-25 | 148 | 228 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL++ltq+f+kll +s++++v+l+e+a+ L+ + ++++k+RR+YDi+NVL++lnliek ++k+++rw g PKA51484.1 148 RKEKSLGQLTQNFVKLLLTSNAETVSLDEAARLLLGDgqdpsHMRTKVRRLYDIANVLSSLNLIEKtyqceTRKPAFRWLG 228 79*****************************************************************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence |
MAEKGESSGR HYSYSRKQKS LGLLCSNFVA LYNREDVETV GLDDAAVKLG VERRRIYDIV 60 NVMESVGVLT RKAKNRYLWI GFKGIPAALE QLKEEALKEL NGLSSEPSAA RASDDEDGDK 120 SLDQNEDDGE GRSCANDIAA KSRTVLDRKE KSLGQLTQNF VKLLLTSNAE TVSLDEAARL 180 LLGDGQDPSH MRTKVRRLYD IANVLSSLNL IEKTYQCETR KPAFRWLGTK GKHDTSVTVA 240 LPPAAQQLGK RMFGTELTNL DIKRSRTVPS VDKKPFKTEL PNAVLKECNL AAQRQLQGSK 300 PFVFGPFSPN PPNEEASQKK IKEAQDFESF ASSLSPTYHS QALHDLFTHY MDAYNSWFAQ 360 IAGSSNIQPS SKKSFPSRHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 2e-93 | E2F/DP family protein |