PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA51353.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

WRKY

Protein Properties

Length: 710aa MW: 78405.5 Da PI: 4.8587

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA51353.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	107	9.3e-34	309	366	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDg+nWrKYGqK+vkgsefprsYY+Ct+++Cpvkk+vers +++++ei+Y+g+Hnh+k PKA51353.1 309 DDGFNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKQVERSI-EGNITEIIYKGSHNHPK 366 8**************************************.*************85 PP
2	WRKY	103.9	8.8e-33	518	576	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k+ver+++d k v++tYeg+Hnh+ PKA51353.1 518 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHAGCTVRKHVERASHDLKSVITTYEGKHNHD 576 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MEARVEPGMG GVDDNITIFS DWATSNPSSR TFASNFFDGD IMSRPFPGYG EDENEGSVKM 60 DSEKHKLRIF SKEEGNETGL ESSSVSVEPI QFTVPKSNLR GALSERMAAR AGFSTLTVNT 120 SRSRTENTIP TSPDVQSSYV LLSPGFSPTT LLESPVFLSN SMAQPSPTTG QFSFASIRDT 180 KAVSASISTK LDKQQVEDVE AFTFPYPSSE SPFFPHLENK ITDQAACTLD QRTSFQSVDA 240 SLQQDINLPN SFSETCQRKG CTEDVIFDEN TSEGFMPNKN SPPFTEDCKD GDTDMKGELS 300 SIPVNTPADD GFNWRKYGQK QVKGSEFPRS YYKCTHPNCP VKKQVERSIE GNITEIIYKG 360 SHNHPKPPPS RRSALPCSQP FSDTPSDGSD HHVLQTNFDG NQTWPNTQNG GSEWGNGGME 420 ATSSSASIAE FCDPSNSMQM HVTSRFESSD VDAPQMLPID EEEDDEATHG DFPGGCDEEE 480 EMDSKRRKQD PYPIDMAASR AVREPRVVVQ TTSEVDILDD GYRWRKYGQK VVKGNPNPRS 540 YYKCTHAGCT VRKHVERASH DLKSVITTYE GKHNHDVPTA RNSSHANSAS SSSAGTPAPQ 600 PLTLPRGPEP AQESFMRFQS HEPIAPFGLQ AAGFSFGIDH KDLGKLGFNN LHTMRPLKMP 660 VFAQMDQYME HYRQVNGGFM IPKGEPKEEV FSESDLPQIS NSILPLGPQM

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MEARVEPGMG GVDDNITIFS DWATSNPSSR TFASNFFDGD IMSRPFPGYG EDENEGSVKM  60
DSEKHKLRIF SKEEGNETGL ESSSVSVEPI QFTVPKSNLR GALSERMAAR AGFSTLTVNT  120
SRSRTENTIP TSPDVQSSYV LLSPGFSPTT LLESPVFLSN SMAQPSPTTG QFSFASIRDT  180
KAVSASISTK LDKQQVEDVE AFTFPYPSSE SPFFPHLENK ITDQAACTLD QRTSFQSVDA  240
SLQQDINLPN SFSETCQRKG CTEDVIFDEN TSEGFMPNKN SPPFTEDCKD GDTDMKGELS  300
SIPVNTPADD GFNWRKYGQK QVKGSEFPRS YYKCTHPNCP VKKQVERSIE GNITEIIYKG  360
SHNHPKPPPS RRSALPCSQP FSDTPSDGSD HHVLQTNFDG NQTWPNTQNG GSEWGNGGME  420
ATSSSASIAE FCDPSNSMQM HVTSRFESSD VDAPQMLPID EEEDDEATHG DFPGGCDEEE  480
EMDSKRRKQD PYPIDMAASR AVREPRVVVQ TTSEVDILDD GYRWRKYGQK VVKGNPNPRS  540
YYKCTHAGCT VRKHVERASH DLKSVITTYE GKHNHDVPTA RNSSHANSAS SSSAGTPAPQ  600
PLTLPRGPEP AQESFMRFQS HEPIAPFGLQ AAGFSFGIDH KDLGKLGFNN LHTMRPLKMP  660
VFAQMDQYME HYRQVNGGFM IPKGEPKEEV FSESDLPQIS NSILPLGPQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	1e-122	WRKY family protein