PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA51076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | NAC | ||||||||
Protein Properties | Length: 243aa MW: 27587.4 Da PI: 8.091 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 102.1 | 7.6e-32 | 2 | 77 | 54 | 128 |
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd+ev ++ +g+lvg+kktLvfykgrap+gekt+Wv+heyrl PKA51076.1 2 GEREWYFFSLRDRKYPTGLRTNRATVAGYWKATGKDREVQASaTGALVGMKKTLVFYKGRAPRGEKTRWVLHEYRL 77 578************************************99878899***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGEREWYFFS LRDRKYPTGL RTNRATVAGY WKATGKDREV QASATGALVG MKKTLVFYKG 60 RAPRGEKTRW VLHEYRLHGE LCLRQACKEE WVICRIFHKG GGEKKISGFY HNPSCFLEPP 120 SSSLQSSFSP VQEDQSLEHS IQSLLMTQTL IHHHPLLPET LENCPLFSLP GPSQPHHFQP 180 LTNPNQEEYF TNWLEPNPQN PNPPCYELAR SHLGPAKHGE GAPILDEPMM GPCFVVRSGP 240 LVP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76420.1 | 2e-55 | NAC family protein |