PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50883.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family NF-YA
Protein Properties Length: 307aa    MW: 33385.6 Da    PI: 10.337
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.73.4e-32166222158
   CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                 d p+YVN+KQy++I++RRq+Rak+e e+kl  k rkpylheSRh hA+rRpRg+gGrF
  PKA50883.1 166 DGPIYVNPKQYHGIVRRRQARAKAELESKL-VKPRKPYLHESRHLHAMRRPRGCGGRF 222
                 57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MSSKSNGDFS QIFLANPASA TSFPWWAGSQ LFYGDASILF KSAPGEQSKR ENSFQAGSRK  60
VGNLAVDERT GLAPAIEDKG VLGIDTAKFS LFPDKDSVKW RKNQQHSATI TLQYPPESDS  120
HLKIGLGQSM VSSDYPYVDQ CYGLLSADGA QAMNGRMLLP SSMTADGPIY VNPKQYHGIV  180
RRRQARAKAE LESKLVKPRK PYLHESRHLH AMRRPRGCGG RFLNTKKAVN GHNAVSKPPT  240
RAAASPSSEV LQSDSGNPTS VSCGSSISGS EVTSMHQNRR TDQFHVINHL RPSIFASFSS  300
GAGFLKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.22e-40NF-YA family protein