PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA50727.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | bHLH | ||||||||
Protein Properties | Length: 210aa MW: 23549.6 Da PI: 9.4218 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.2 | 8.1e-05 | 28 | 76 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + + erE+ Rd++N+ f++L l +a + + Ka++L A + +++L PKA50727.1 28 KIHKAEREKLKRDQLNDLFFQLGYALDSA----RQNNGKASVLSDAARLLRDL 76 567889********************998....56777888888888777765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MDTGSKLADK PVNESIPKRK NYCKVPKKIH KAEREKLKRD QLNDLFFQLG YALDSARQNN 60 GKASVLSDAA RLLRDLIAHV GSLRKENSAL LSESQYVTVE KNELQDENGG LQAEIQRLKS 120 ELLRERIDGD PASSSSPSLP PPVFVLPLQQ LEELPSPPVA KPPSSSHVVS RPHARYPTPC 180 DSWPQEFLLS RNQKRPPRTA WREGEDQSLA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 9e-32 | bHLH family protein |