PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA50555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | WRKY | ||||||||
Protein Properties | Length: 248aa MW: 28097.4 Da PI: 5.3759 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 69 | 6.9e-22 | 87 | 147 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEE.E-SSSTTEEEEEEES--SS CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkve.rsaedpkvveitYegeHnh 58 Dgy+WrKYGqK++++s++prsYYrC+++ +C++ k+v+ +++e+p+v +++Y+ +H++ PKA50555.1 87 GDGYRWRKYGQKKIHNSNHPRSYYRCAYRedmNCKAMKQVQlKDSEEPHVYTVIYTWHHTC 147 5***************************99999********4556899***********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MASVEKKELS LIKSVEGAIK ELDRGHELAL SLLHLLSAAS AHGDRELEAE RRDLAKQVLS 60 AFSVAVSHLK YCRTRREADQ AASTPHGDGY RWRKYGQKKI HNSNHPRSYY RCAYREDMNC 120 KAMKQVQLKD SEEPHVYTVI YTWHHTCGTM LEAFPELEIS PSSARDTFLI SFESNPEDTA 180 KLNPMFSSSS TLSRSGGLRT DDDEQVYSSS SLPVVVADHG MGEEKDLLEF EFDTDELDQC 240 LSWFESLI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 2e-18 | WRKY family protein |