PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50528.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family MYB_related
Protein Properties Length: 272aa    MW: 30364.1 Da    PI: 7.4619
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50528.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.57.3e-09951242248
                      T....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  22 g....tWktIartmgkgRtlkqcksrwqkyl 48 
                           +W++Ia +++  Rt++++k++w+++l
       PKA50528.1  95 AgdqaRWAAIATYLP-QRTDNDIKNYWNTHL 124
                      355668*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MRKAVRRCDP LTAVQPAGSL TLAPDLSLFS PDPRLSRTPR SRHGSLGRRW IAQAARPPDR  60
PAASWPRACA GIGRRERGRG IMQELQAEVD QLPPAGDQAR WAAIATYLPQ RTDNDIKNYW  120
NTHLKKRVKH QEPAASCIPK SCNTDKFESS GISGPENFNK SSSSTYASST ENISRLLEGW  180
IKSSPIPNLN PSHEMNGNNI SYAFPQDCFI RENKAMTDLH GEINSLLGFD DSESEMRMES  240
LKPPMFFLEK WLLEESAGQA EEAFMDLSAA DY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.24e-22MYB_related family protein