PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA50501.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | MYB_related | ||||||||
Protein Properties | Length: 322aa MW: 35293.6 Da PI: 5.6186 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.2 | 9.4e-19 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+eEd +l +++q+G+++W++I++ g+ R++k+c++rw +yl PKA50501.1 14 RGQWTPEEDNKLSSYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYL 61 89********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MGRIPCCEKD NVKRGQWTPE EDNKLSSYIA QHGTRNWRLI PKNAGLQRCG KSCRLRWTNY 60 LRPDLKHGEF SESEEQTIVK LHSLPGRTDN DVKNHWNTKL KKKLTGMGID HVTHKPFSHL 120 MAEIATTLPP PQVAHLAEAA LGCFKDEMLH LLTKKRIDFS STSAATAASG GGLTDPGLED 180 YDREETIQKI KLGLSRAIMQ EPGPKKEWVP MGVLGRDDVE PPDNDMLCDV YAADISDVYR 240 YGGQPTYVND VEGSAWSTCT GNGGSRAAEL HGGLGGVRIK GDDEGGEGSE DGKGESKSGD 300 TALFGSECVL WDLSDDLMNP LV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56110.1 | 1e-103 | MYB family protein |