PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA50491.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 387aa MW: 43169.3 Da PI: 7.5753 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 356.6 | 3.8e-109 | 32 | 386 | 3 | 374 |
GRAS 3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshltaNq 100 +lLl+cAe ++s+d+++a+++++ l +s +gd+ Rl +yf +ALa rl r s+l +p + + ++ ++++ +l f+++ P+l+f+hltaNq PKA50491.1 32 RLLLHCAELIHSSDFSAARRAVSLLLAASSASGDSADRLNHYFSRALALRLRR-LSGLLPPPSPPPPHLASQYFSTQSSHLfFNQLAPFLRFAHLTANQ 129 79**************************************************9.6666655444444433444444444447***************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199 aIle+++g++ +Hi+Dfd+++GlQWp+Llq+La+R ++pp +RiTg gs + e l +t +rL++fA++l ++f+f++l +++ +++ +p+ PKA50491.1 130 AILESISGHRSIHIVDFDVGHGLQWPPLLQSLADR-SDPPAVRITGTGS----EPEILFHTCRRLQSFADSLSLKFNFHPLCLPPTAS---FSFQSEPD 220 ***********************************.6679*********....99*************************95555555...588899** PP GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298 E laVn++l lh+l+ e +++L++vk+++P vv+v+e+e ++s+ Flerf+eal yysalf+slea+lp++s+er++vE+ +lgrei+ +v PKA50491.1 221 ELLAVNCILFLHKLP--------ELRRFLRAVKGMNPSVVTVAEREGRRGSPVFLERFAEALTYYSALFESLEATLPPASRERRVVEELVLGREIEGIV 311 **************9........4667************************************************************************ PP GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 a +++e et+e+W+e ++++GF ++pls +a++qaklllr ++ s+gy +e +gs++lgW+++pL+svS+Wr PKA50491.1 312 AGSEEE--GSGETAERWEEEMGASGFVKLPLSAFAVAQAKLLLRLHYpSEGYLLETTKGSIFLGWRNKPLFSVSSWR 386 *99998..9999****************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 387 aa Download sequence |
MLTSFKSHEE LHHHLLRPPP HEPAPRPGHH HRLLLHCAEL IHSSDFSAAR RAVSLLLAAS 60 SASGDSADRL NHYFSRALAL RLRRLSGLLP PPSPPPPHLA SQYFSTQSSH LFFNQLAPFL 120 RFAHLTANQA ILESISGHRS IHIVDFDVGH GLQWPPLLQS LADRSDPPAV RITGTGSEPE 180 ILFHTCRRLQ SFADSLSLKF NFHPLCLPPT ASFSFQSEPD ELLAVNCILF LHKLPELRRF 240 LRAVKGMNPS VVTVAEREGR RGSPVFLERF AEALTYYSAL FESLEATLPP ASRERRVVEE 300 LVLGREIEGI VAGSEEEGSG ETAERWEEEM GASGFVKLPL SAFAVAQAKL LLRLHYPSEG 360 YLLETTKGSI FLGWRNKPLF SVSSWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55580.1 | 6e-77 | GRAS family protein |