PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50491.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 387aa    MW: 43169.3 Da    PI: 7.5753
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50491.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS356.63.8e-109323863374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilkfshltaNq 100
                 +lLl+cAe ++s+d+++a+++++ l   +s +gd+  Rl +yf +ALa rl r  s+l    +p + +  ++  ++++ +l f+++ P+l+f+hltaNq
  PKA50491.1  32 RLLLHCAELIHSSDFSAARRAVSLLLAASSASGDSADRLNHYFSRALALRLRR-LSGLLPPPSPPPPHLASQYFSTQSSHLfFNQLAPFLRFAHLTANQ 129
                 79**************************************************9.6666655444444433444444444447***************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpg 199
                 aIle+++g++ +Hi+Dfd+++GlQWp+Llq+La+R ++pp +RiTg gs    + e l +t +rL++fA++l ++f+f++l    +++    +++ +p+
  PKA50491.1 130 AILESISGHRSIHIVDFDVGHGLQWPPLLQSLADR-SDPPAVRITGTGS----EPEILFHTCRRLQSFADSLSLKFNFHPLCLPPTAS---FSFQSEPD 220
                 ***********************************.6679*********....99*************************95555555...588899** PP

        GRAS 200 EalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvv 298
                 E laVn++l lh+l+        e +++L++vk+++P vv+v+e+e  ++s+ Flerf+eal yysalf+slea+lp++s+er++vE+ +lgrei+ +v
  PKA50491.1 221 ELLAVNCILFLHKLP--------ELRRFLRAVKGMNPSVVTVAEREGRRGSPVFLERFAEALTYYSALFESLEATLPPASRERRVVEELVLGREIEGIV 311
                 **************9........4667************************************************************************ PP

        GRAS 299 acegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 a +++e     et+e+W+e ++++GF ++pls +a++qaklllr ++ s+gy +e  +gs++lgW+++pL+svS+Wr
  PKA50491.1 312 AGSEEE--GSGETAERWEEEMGASGFVKLPLSAFAVAQAKLLLRLHYpSEGYLLETTKGSIFLGWRNKPLFSVSSWR 386
                 *99998..9999****************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MLTSFKSHEE LHHHLLRPPP HEPAPRPGHH HRLLLHCAEL IHSSDFSAAR RAVSLLLAAS  60
SASGDSADRL NHYFSRALAL RLRRLSGLLP PPSPPPPHLA SQYFSTQSSH LFFNQLAPFL  120
RFAHLTANQA ILESISGHRS IHIVDFDVGH GLQWPPLLQS LADRSDPPAV RITGTGSEPE  180
ILFHTCRRLQ SFADSLSLKF NFHPLCLPPT ASFSFQSEPD ELLAVNCILF LHKLPELRRF  240
LRAVKGMNPS VVTVAEREGR RGSPVFLERF AEALTYYSAL FESLEATLPP ASRERRVVEE  300
LVLGREIEGI VAGSEEEGSG ETAERWEEEM GASGFVKLPL SAFAVAQAKL LLRLHYPSEG  360
YLLETTKGSI FLGWRNKPLF SVSSWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G55580.16e-77GRAS family protein