PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA50069.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family Trihelix
Protein Properties Length: 377aa    MW: 42898.2 Da    PI: 5.9963
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA50069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix83.23.4e-2662146286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W ++e+l+Li +rrem++ ++++k++k+lW ++s+kmre+gfers+++C++kw+nl k+ykk k++++ r s+ s +++ +++le
  PKA50069.1  62 WLQEETLCLIVLRREMDRLFNTSKSNKHLWGQISAKMREKGFERSATMCTDKWRNLMKEYKKSKHHRSVRGSGGSAKMACYKELE 146
                 **********************************************************************999999******998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MSLALTLEQL LAGEDLSFSG KGEEELVEGS RRKRMTIREV SGGDDQDGRV SGPSPKKRAE  60
TWLQEETLCL IVLRREMDRL FNTSKSNKHL WGQISAKMRE KGFERSATMC TDKWRNLMKE  120
YKKSKHHRSV RGSGGSAKMA CYKELEELLK EREHSKDCVS LKRVESFLQF TEKGLEDASL  180
LFGSVEATDR SPLNQDRNFD RDPETLAITA ADTVAAAGIP PWNWKDTSAN DEDNPSYVGR  240
VILVKFGEYS RKIGIDGSAE SIKEAIKSAF GLRTRRAFWL EDEDEVVRSL DRDMPLGTYN  300
LHLDEGLTIK LCTYDESNRL SVRTEEKTLY SQEDFHDFMM RRGWTGLREI SSSRTADTLD  360
DVQHGALYQA ILVSRSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25990.11e-126Trihelix family protein