PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49836.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 484aa MW: 54005.7 Da PI: 6.1616 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 454.6 | 6.1e-139 | 114 | 484 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 l+++L++cA+a+++++ la++l+++l++++s +g+p++Rl ay++e+L arl++s+s +ykal+++e + sse l+++++++e++P++kf+++ aN PKA49836.1 114 LKQALIACARAIEENNILLAEWLMTELRQMVSVSGEPIERLGAYMVEGLVARLSSSGSVIYKALKCKEPT---SSELLSYMHILYEICPYFKFGYMSAN 209 6799*****************************************************************9...9************************* PP GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196 aI eav+ge+rvHiiDf+isqG QW++L qaLa+Rp+gpp lRiTg++++ s+ + l+ +g+rL+ +Ae++++pfef++ ++ +++e+++Lr+ PKA49836.1 210 GAIAEAVKGEDRVHIIDFQISQGNQWVSLVQALAARPGGPPFLRITGIDDSFSSyaRGGGLHLVGKRLSLLAESCKIPFEFHP-AVLLDSEVEINNLRI 307 **************************************************776688999************************.7888999******** PP GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295 pgEal+Vn+++qlh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n++ Fl rf+e+l+yy+alf+s++++lpre++eri vE+++++r+iv PKA49836.1 308 LPGEALVVNFAFQLHHVPDESVSTENRRDRLLRLVKSLSPKVVTLVEQESNTNTAAFLPRFMETLDYYTALFESIDVTLPRENKERIHVEQHCVARDIV 406 *************************************************************************************************** PP GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 nv+acegaer+erhe +kW++r+++aGF+p+pl+ +++++k+ll+++ + yr+ee++g+l+lgW++r+Lv+ SaWr PKA49836.1 407 NVIACEGAERVERHELHGKWKSRFKMAGFSPYPLNPVVNATIKSLLENYCD-KYRLEERDGALFLGWMNRALVVSSAWR 484 *************************************************95.5*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 484 aa Download sequence |
MKESDLRRPP PNYQSSCDCS QMRKSSHQTS HVQYCTLDSS AIASYTHGSP STISSLSSDY 60 TSGSPVSASS ITEDLDDLKL KIKHLESIML GPEADAVDSL DTSRLLMEIP KGDLKQALIA 120 CARAIEENNI LLAEWLMTEL RQMVSVSGEP IERLGAYMVE GLVARLSSSG SVIYKALKCK 180 EPTSSELLSY MHILYEICPY FKFGYMSANG AIAEAVKGED RVHIIDFQIS QGNQWVSLVQ 240 ALAARPGGPP FLRITGIDDS FSSYARGGGL HLVGKRLSLL AESCKIPFEF HPAVLLDSEV 300 EINNLRILPG EALVVNFAFQ LHHVPDESVS TENRRDRLLR LVKSLSPKVV TLVEQESNTN 360 TAAFLPRFME TLDYYTALFE SIDVTLPREN KERIHVEQHC VARDIVNVIA CEGAERVERH 420 ELHGKWKSRF KMAGFSPYPL NPVVNATIKS LLENYCDKYR LEERDGALFL GWMNRALVVS 480 SAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G48150.1 | 0.0 | GRAS family protein |