PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PKA49703.1
Organism
Apostasia shenzhenica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
Family GRAS
Protein Properties Length: 567aa    MW: 61337.1 Da    PI: 4.4608
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PKA49703.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS324.52.1e-992155672374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  + Ll+cA+ ++s +  la +++ ++s ++s +g+p++Rl++yf eAL+ rl++                     ++  +k+f++++P+ kf+hltaNq
  PKA49703.1 215 LKSLLDCARILDS-EPDLAAKAVVQISGQVSDRGNPTERLTFYFSEALRCRLLD---------------------VTLCYKTFNDACPFSKFAHLTANQ 291
                 5789*****8776.7888999999*****************************9.....................456899****************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                 aIlea+e +er+ iiDf+i qG+QW+aLlqa+a+Rp+g+p ++Ri g+ +++ g   + +l +tg+rL +fA+ lg++fef++ v   +++l+ +++rv
  PKA49703.1 292 AILEATELAERIRIIDFGIVQGIQWAALLQAFATRPAGKPsRIRISGIPAASLGasPAASLAATGNRLLDFARLLGLDFEFEP-VLIPVQNLTADSFRV 389
                 ************************************776669********98889999*************************.6889*********** PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +p+Ea+aVn++lqlh+ll+e+ ++ +   + ++l ksl+P vv++ e+ea++n+  F+erf +al y++a+f+slea+++r+se+r+ vEr+llg++i 
  PKA49703.1 390 EPDEAVAVNFMLQLHTLLAETDETVE---RAIRLAKSLRPSVVTLGEHEASLNRVGFAERFENALAYFVAVFESLEAGMGRDSEDRARVERVLLGPRIL 485
                 ******************88888888...9********************************************************************* PP

        GRAS 296 nvvac.egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee.sgslvlgWkdrpLvsvSaWr 374
                  +v   eg++rrer+e   kW + +e +G++ vpls++a +qaklll +++ s  y++ ++  g l l W+d pL++vS+Wr
  PKA49703.1 486 GAVGPgEGQQRRERMEGCDKWTALMEGCGLELVPLSNYAISQAKLLLWNYDySYKYSLLDSpAGFLSLAWEDVPLLTVSSWR 567
                 ***8538999*****************************************8888888766266666**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 567 aa     Download sequence    
MAYMCADSGN LMAIAQQVIQ QKQQQQRQQQ QQSIAAAATD TVSASGNPFA GTTSQWGGQG  60
GGHPQASMRE HFPFVLPEPA YADPFASDSV PTGVLGFPPP MHLDHAAFPA GEFDSDEWME  120
SLIGESNDGS DPMSDAWQGG DASSELPPLF SDAFASSSTS ISLPSHASTS DLDRVVYPGS  180
CKIVPSAAES LSFDPPPPPQ PNKNSTDSKS TPLLLKSLLD CARILDSEPD LAAKAVVQIS  240
GQVSDRGNPT ERLTFYFSEA LRCRLLDVTL CYKTFNDACP FSKFAHLTAN QAILEATELA  300
ERIRIIDFGI VQGIQWAALL QAFATRPAGK PSRIRISGIP AASLGASPAA SLAATGNRLL  360
DFARLLGLDF EFEPVLIPVQ NLTADSFRVE PDEAVAVNFM LQLHTLLAET DETVERAIRL  420
AKSLRPSVVT LGEHEASLNR VGFAERFENA LAYFVAVFES LEAGMGRDSE DRARVERVLL  480
GPRILGAVGP GEGQQRRERM EGCDKWTALM EGCGLELVPL SNYAISQAKL LLWNYDYSYK  540
YSLLDSPAGF LSLAWEDVPL LTVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-135GRAS family protein