PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49703.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GRAS | ||||||||
Protein Properties | Length: 567aa MW: 61337.1 Da PI: 4.4608 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 324.5 | 2.1e-99 | 215 | 567 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100 + Ll+cA+ ++s + la +++ ++s ++s +g+p++Rl++yf eAL+ rl++ ++ +k+f++++P+ kf+hltaNq PKA49703.1 215 LKSLLDCARILDS-EPDLAAKAVVQISGQVSDRGNPTERLTFYFSEALRCRLLD---------------------VTLCYKTFNDACPFSKFAHLTANQ 291 5789*****8776.7888999999*****************************9.....................456899****************** PP GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196 aIlea+e +er+ iiDf+i qG+QW+aLlqa+a+Rp+g+p ++Ri g+ +++ g + +l +tg+rL +fA+ lg++fef++ v +++l+ +++rv PKA49703.1 292 AILEATELAERIRIIDFGIVQGIQWAALLQAFATRPAGKPsRIRISGIPAASLGasPAASLAATGNRLLDFARLLGLDFEFEP-VLIPVQNLTADSFRV 389 ************************************776669********98889999*************************.6889*********** PP GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295 +p+Ea+aVn++lqlh+ll+e+ ++ + + ++l ksl+P vv++ e+ea++n+ F+erf +al y++a+f+slea+++r+se+r+ vEr+llg++i PKA49703.1 390 EPDEAVAVNFMLQLHTLLAETDETVE---RAIRLAKSLRPSVVTLGEHEASLNRVGFAERFENALAYFVAVFESLEAGMGRDSEDRARVERVLLGPRIL 485 ******************88888888...9********************************************************************* PP GRAS 296 nvvac.egaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee.sgslvlgWkdrpLvsvSaWr 374 +v eg++rrer+e kW + +e +G++ vpls++a +qaklll +++ s y++ ++ g l l W+d pL++vS+Wr PKA49703.1 486 GAVGPgEGQQRRERMEGCDKWTALMEGCGLELVPLSNYAISQAKLLLWNYDySYKYSLLDSpAGFLSLAWEDVPLLTVSSWR 567 ***8538999*****************************************8888888766266666**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 567 aa Download sequence |
MAYMCADSGN LMAIAQQVIQ QKQQQQRQQQ QQSIAAAATD TVSASGNPFA GTTSQWGGQG 60 GGHPQASMRE HFPFVLPEPA YADPFASDSV PTGVLGFPPP MHLDHAAFPA GEFDSDEWME 120 SLIGESNDGS DPMSDAWQGG DASSELPPLF SDAFASSSTS ISLPSHASTS DLDRVVYPGS 180 CKIVPSAAES LSFDPPPPPQ PNKNSTDSKS TPLLLKSLLD CARILDSEPD LAAKAVVQIS 240 GQVSDRGNPT ERLTFYFSEA LRCRLLDVTL CYKTFNDACP FSKFAHLTAN QAILEATELA 300 ERIRIIDFGI VQGIQWAALL QAFATRPAGK PSRIRISGIP AASLGASPAA SLAATGNRLL 360 DFARLLGLDF EFEPVLIPVQ NLTADSFRVE PDEAVAVNFM LQLHTLLAET DETVERAIRL 420 AKSLRPSVVT LGEHEASLNR VGFAERFENA LAYFVAVFES LEAGMGRDSE DRARVERVLL 480 GPRILGAVGP GEGQQRRERM EGCDKWTALM EGCGLELVPL SNYAISQAKL LLWNYDYSYK 540 YSLLDSPAGF LSLAWEDVPL LTVSSWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66770.1 | 1e-135 | GRAS family protein |