PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA49689.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HB-other

Protein Properties

Length: 362aa MW: 40618.4 Da PI: 5.74

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA49689.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.6e-09	290	326	19	55
HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ PKA49689.1 290 HQKWPYPSESEKIALAESTGLDQKQINNWFINQRKRH 326 56789*****************************885 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MDDFSPLGGF NQQRGGHEDY MYSILSSPSS SHTLKPGSLV AAPAATCSPP AVASASSSQS 60 ALGSSGKPPP DADAIKARII SHPHYPNLVG AYMNCHKVGA PPEVAAQLST IAGELELRQP 120 AVSGSNDPEL DQFMEAYYHM LVKYREELAR PLDEAADFLR RVESQLNSVT GGSPRLHCSA 180 GNSCYNHRPP FYFKYVYIDL EVEGYRMRLT MEFPSHHGGE QWKTLVKCFD FEDDLGKTGE 240 SLSEDDQLDC CAGETTFEAE DDPRELSKKK KKGKLPREAR QKLLSWWELH QKWPYPSESE 300 KIALAESTGL DQKQINNWFI NQRKRHWKPP EDMQFMVLDG YHNQQNAASF YMDDGSMYRL 360 GP

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MDDFSPLGGF NQQRGGHEDY MYSILSSPSS SHTLKPGSLV AAPAATCSPP AVASASSSQS  60
ALGSSGKPPP DADAIKARII SHPHYPNLVG AYMNCHKVGA PPEVAAQLST IAGELELRQP  120
AVSGSNDPEL DQFMEAYYHM LVKYREELAR PLDEAADFLR RVESQLNSVT GGSPRLHCSA  180
GNSCYNHRPP FYFKYVYIDL EVEGYRMRLT MEFPSHHGGE QWKTLVKCFD FEDDLGKTGE  240
SLSEDDQLDC CAGETTFEAE DDPRELSKKK KKGKLPREAR QKLLSWWELH QKWPYPSESE  300
KIALAESTGL DQKQINNWFI NQRKRHWKPP EDMQFMVLDG YHNQQNAASF YMDDGSMYRL  360
GP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	6e-61	TALE family protein