PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA49656.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

HB-other

Protein Properties

Length: 1859aa MW: 208405 Da PI: 5.3285

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA49656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.3e-18	30	84	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR +++qle+Le+ ++++ yps++ r+eL++k+gL++rq ++WF+ rR k++k PKA49656.1 30 KRKMKSPYQLEILEKTYAMETYPSEALRAELSAKTGLSDRQLQMWFCHRRLKDRK 84 79999************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1859 aa Download sequence
MEIADSADGK PPPPPEGWKK PPEGGDKPPK RKMKSPYQLE ILEKTYAMET YPSEALRAEL 60 SAKTGLSDRQ LQMWFCHRRL KDRKYTPAKR AKKEEEPLTL PQSGSEMMAA VAGSSSAAPS 120 SIPFAAGGGE PRKAVARVSP AASRFGAEFS VGKRYYEPPI LPPQPPQLSV LELRVIASVE 180 AQLGEPLRED GPILGVEFDP LPPGAFGAPI EPDLPSHSTH GHASSHQFLE RMESSGVSAH 240 TKHLVRSYDG KMKTSAFLPS MEHTFLPSSS GNKRKVAITG AHAIHPQVAP RALQEYQFLP 300 EQPSIRSDSY ERVPQSHFYD SPIAASSSRL SSVPSGSPYM HGNEQLAPTY TFQGQISGAG 360 LFSQQGRQQL YSSEYDSAPH GSPFGNSTPD PQFGIHQAMD PENPFSSSER RNFRDEDPYR 420 TERKRKSEEA RIAKEVEAHE KRIRKELEKQ DILRRKREEQ MRREVERLDR ERRKEEERML 480 REKQREEERF LREQRRENER REKILLKESR RAEKLRQKEE LRREKEAARL KAANERATAR 540 RIAKESMELI EDERLELMEL VASRKGLQSI VSLDSDTLEH LDNFRDLLAP FPPKSVKLKK 600 PFAVRPWIDS EENVGNFLMV WKFLITFADV LGLWPFTLDE FLQSLHDYDS RLLGEIHVAL 660 LKSIIKDIED VARAPVVAVG INQSSAANPG GGHPQIVEGA YAWGFNICSW QRHLNFLTWP 720 EILRQFALSA GFGPQLKKKN IERAYFRDDN EVNDGQDVVT ILRNGAAAEN AVALMQERGY 780 NHRRRRRHRL TPGTVKFAAF HVLSLEGSRG LTILEVADKI QRSGLRDLTT SKTPEASIAA 840 ALSRDTKLFE RTAPSTYCVR AAFRKNPADA DIILAAAREK IQVFHSGLSD SEEVEKDTED 900 VDDGDRDEDS DCEGADDPEV DDCSAEVRSS KHLSYTNKLK EVIGANLTNK GKEELLSEGL 960 LLTSQSSLRD SGNDVPVISA EHSKRACISG ASQLTIISSE CNGVGDTNIQ DSDIDESNYG 1020 EHWVQGLTEG NYTDLSVEER LNALVALVGV AIEGNSMRVI LEERLEAANA LKKQMWAEAQ 1080 LDKRRYKEEY LNKSHYSSFS ICRPEVSQAI MGSDGSQTPM QQSDTKENDG NLELLSNNQY 1140 PEVYGQNNFG NLASERNALG QEFSTYPDSF PVQQYGHVAE KSRFQIKSFI GHKAEQLYVY 1200 RSLPLGQDRR RNRYWLFSTS ASPNDPGSGR IFCESRDGLW WLIDSEEAFD ALQSAFDTRG 1260 VRESHLHSML QRIETSFKEA VRRNKKGNIS ANTMESRVRG GSTQLTCSPD FHKEFNSSSS 1320 TLSGLSVDVE SSFKVDLGRN KLERIEALKR YQGFLKWMCK ECYNPLVLSA MRYGKKRCSE 1380 LLQTCYICYH SYFTEEKHCT SCHRTFKLIH NGDLMYSEHV AVCQAKRKVD RDSGNQMLDS 1440 SLPIGVCLLK AQLSLVEVSV PAEALQHFWT EGYRKSWGVK LNSAASAEDL LQLLTLLEVA 1500 IKRDCLSSNF ETTNELLSLA SAFGGDNSAL VSGSVPVLPW IPDSTSAVAL RLLELDAAIS 1560 YMPQQNLESQ TGRETDDFIK LPSRFTIMKN INKFEISGTL EQHDYQREGT WLDPGNRRRG 1620 RGRGSRGGRV ARGRGRGGRG SRATSLVPKS GFNEENSSIF GNARRQYNRR GRTGRTRGRG 1680 RRFGRRSVRA RPRSESRAEP PKATLFGGFC DVGTCGKEDS VEESPTSVGC DDWGIEARTY 1740 VEDDDNSTGS QSDENGQAFG DDDYDDQALD YTTRYNEPRS MGLMDDDSED EADGDAEEED 1800 EDGEQGESKD MEVDVDEEDE EIGNEEEVGD AGEGSGDEEE EEDEEEDADA SSFSSGYSG

Sequence ? help Back to Top

Protein Sequence Length: 1859 aa Download sequence

MEIADSADGK PPPPPEGWKK PPEGGDKPPK RKMKSPYQLE ILEKTYAMET YPSEALRAEL  60
SAKTGLSDRQ LQMWFCHRRL KDRKYTPAKR AKKEEEPLTL PQSGSEMMAA VAGSSSAAPS  120
SIPFAAGGGE PRKAVARVSP AASRFGAEFS VGKRYYEPPI LPPQPPQLSV LELRVIASVE  180
AQLGEPLRED GPILGVEFDP LPPGAFGAPI EPDLPSHSTH GHASSHQFLE RMESSGVSAH  240
TKHLVRSYDG KMKTSAFLPS MEHTFLPSSS GNKRKVAITG AHAIHPQVAP RALQEYQFLP  300
EQPSIRSDSY ERVPQSHFYD SPIAASSSRL SSVPSGSPYM HGNEQLAPTY TFQGQISGAG  360
LFSQQGRQQL YSSEYDSAPH GSPFGNSTPD PQFGIHQAMD PENPFSSSER RNFRDEDPYR  420
TERKRKSEEA RIAKEVEAHE KRIRKELEKQ DILRRKREEQ MRREVERLDR ERRKEEERML  480
REKQREEERF LREQRRENER REKILLKESR RAEKLRQKEE LRREKEAARL KAANERATAR  540
RIAKESMELI EDERLELMEL VASRKGLQSI VSLDSDTLEH LDNFRDLLAP FPPKSVKLKK  600
PFAVRPWIDS EENVGNFLMV WKFLITFADV LGLWPFTLDE FLQSLHDYDS RLLGEIHVAL  660
LKSIIKDIED VARAPVVAVG INQSSAANPG GGHPQIVEGA YAWGFNICSW QRHLNFLTWP  720
EILRQFALSA GFGPQLKKKN IERAYFRDDN EVNDGQDVVT ILRNGAAAEN AVALMQERGY  780
NHRRRRRHRL TPGTVKFAAF HVLSLEGSRG LTILEVADKI QRSGLRDLTT SKTPEASIAA  840
ALSRDTKLFE RTAPSTYCVR AAFRKNPADA DIILAAAREK IQVFHSGLSD SEEVEKDTED  900
VDDGDRDEDS DCEGADDPEV DDCSAEVRSS KHLSYTNKLK EVIGANLTNK GKEELLSEGL  960
LLTSQSSLRD SGNDVPVISA EHSKRACISG ASQLTIISSE CNGVGDTNIQ DSDIDESNYG  1020
EHWVQGLTEG NYTDLSVEER LNALVALVGV AIEGNSMRVI LEERLEAANA LKKQMWAEAQ  1080
LDKRRYKEEY LNKSHYSSFS ICRPEVSQAI MGSDGSQTPM QQSDTKENDG NLELLSNNQY  1140
PEVYGQNNFG NLASERNALG QEFSTYPDSF PVQQYGHVAE KSRFQIKSFI GHKAEQLYVY  1200
RSLPLGQDRR RNRYWLFSTS ASPNDPGSGR IFCESRDGLW WLIDSEEAFD ALQSAFDTRG  1260
VRESHLHSML QRIETSFKEA VRRNKKGNIS ANTMESRVRG GSTQLTCSPD FHKEFNSSSS  1320
TLSGLSVDVE SSFKVDLGRN KLERIEALKR YQGFLKWMCK ECYNPLVLSA MRYGKKRCSE  1380
LLQTCYICYH SYFTEEKHCT SCHRTFKLIH NGDLMYSEHV AVCQAKRKVD RDSGNQMLDS  1440
SLPIGVCLLK AQLSLVEVSV PAEALQHFWT EGYRKSWGVK LNSAASAEDL LQLLTLLEVA  1500
IKRDCLSSNF ETTNELLSLA SAFGGDNSAL VSGSVPVLPW IPDSTSAVAL RLLELDAAIS  1560
YMPQQNLESQ TGRETDDFIK LPSRFTIMKN INKFEISGTL EQHDYQREGT WLDPGNRRRG  1620
RGRGSRGGRV ARGRGRGGRG SRATSLVPKS GFNEENSSIF GNARRQYNRR GRTGRTRGRG  1680
RRFGRRSVRA RPRSESRAEP PKATLFGGFC DVGTCGKEDS VEESPTSVGC DDWGIEARTY  1740
VEDDDNSTGS QSDENGQAFG DDDYDDQALD YTTRYNEPRS MGLMDDDSED EADGDAEEED  1800
EDGEQGESKD MEVDVDEEDE EIGNEEEVGD AGEGSGDEEE EEDEEEDADA SSFSSGYSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein