PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PKA49620.1

Organism

Apostasia shenzhenica

Taxonomic ID

1088818

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia

Family

TALE

Protein Properties

Length: 761aa MW: 82606.8 Da PI: 7.1356

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PKA49620.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.4	2.9e-09	553	590	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + PKA49620.1 553 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 590 554459******************************88 PP
2	BELL	119.4	1.6e-38	411	481	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e+q+kk+kL+s+l+eVd+rY++y+eq+q+v++sF++v+g g+a+pYt+lA+ka+SrhFrcLkd +a q+ PKA49620.1 411 RFENQRKKTKLVSILDEVDRRYNHYCEQMQMVVNSFDTVMGFGAATPYTALAQKAMSRHFRCLKDSVAAQL 481 779*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence
MGVATPPPPP PLQPFPSKPI SLRPNTAAAA ASMSQGFHLG GIFSFSDEFE RQGSGQNHQA 60 QQQQQPPPPQ QQQQHVAQQS RRDKLRVQGL DASAVSAAGH HLMPIDEDEE EAGIYEPSGT 120 SNMLSDLFNF PGVPAPASAT DLLAGQISAA GYHRLHQRPI VGLSADWYGA NRQDLAANLN 180 SLEDAAAAVA KHQVLTADSS SAMQLFFMNP LPAAPQQLHH HQYHLDRHQR SPSPQPSATL 240 HHHHSQPFIG GAAGPSAAAA FGENSAIIER GEVMDRQGLS LSLSSPLQQF DMGKPEELRV 300 RDGLVFFSNQ PPSSLQPQSQ VHQAQAHQVH MGYGAVVNVL RNSRYSRAAQ ELLEEFCSVG 360 SGQLRRTRSG RASSNPNPST ASSSAAATAA AAAAASSSTS KDHPPLSPAD RFENQRKKTK 420 LVSILDEVDR RYNHYCEQMQ MVVNSFDTVM GFGAATPYTA LAQKAMSRHF RCLKDSVAAQ 480 LKQTCELLGE KDAGGCGGGS GLTKGETPRL RLIDQSLRQQ RAFHQMGIMD QEAWRPQRGL 540 PERSVNVLRS WLFEHFLHPY PSDADKHLLA RQTGLSRNQV SNWFINARVR LWKPMVEEMY 600 QQEAKEETEL PNIMEEETNI QSVAAAALRH HQQQQQEQKG AGRQSPESDA LESDPSSSAP 660 TPRSQQLQYQ QLRFDTHPRR GSPPEDASAA AAAPAAVAAA GIENVPRFHE DMYRRAAAAA 720 AAQVRFGGGA ASGDVSLTLG LRHAGGNAPE TDRFGARDHF G

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence

MGVATPPPPP PLQPFPSKPI SLRPNTAAAA ASMSQGFHLG GIFSFSDEFE RQGSGQNHQA  60
QQQQQPPPPQ QQQQHVAQQS RRDKLRVQGL DASAVSAAGH HLMPIDEDEE EAGIYEPSGT  120
SNMLSDLFNF PGVPAPASAT DLLAGQISAA GYHRLHQRPI VGLSADWYGA NRQDLAANLN  180
SLEDAAAAVA KHQVLTADSS SAMQLFFMNP LPAAPQQLHH HQYHLDRHQR SPSPQPSATL  240
HHHHSQPFIG GAAGPSAAAA FGENSAIIER GEVMDRQGLS LSLSSPLQQF DMGKPEELRV  300
RDGLVFFSNQ PPSSLQPQSQ VHQAQAHQVH MGYGAVVNVL RNSRYSRAAQ ELLEEFCSVG  360
SGQLRRTRSG RASSNPNPST ASSSAAATAA AAAAASSSTS KDHPPLSPAD RFENQRKKTK  420
LVSILDEVDR RYNHYCEQMQ MVVNSFDTVM GFGAATPYTA LAQKAMSRHF RCLKDSVAAQ  480
LKQTCELLGE KDAGGCGGGS GLTKGETPRL RLIDQSLRQQ RAFHQMGIMD QEAWRPQRGL  540
PERSVNVLRS WLFEHFLHPY PSDADKHLLA RQTGLSRNQV SNWFINARVR LWKPMVEEMY  600
QQEAKEETEL PNIMEEETNI QSVAAAALRH HQQQQQEQKG AGRQSPESDA LESDPSSSAP  660
TPRSQQLQYQ QLRFDTHPRR GSPPEDASAA AAAPAAVAAA GIENVPRFHE DMYRRAAAAA  720
AAQVRFGGGA ASGDVSLTLG LRHAGGNAPE TDRFGARDHF G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-123	TALE family protein