PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PKA49359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Apostasioideae; Apostasia
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Family | GATA | ||||||||
Protein Properties | Length: 307aa MW: 33297.5 Da PI: 6.2549 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 44.8 | 1.7e-14 | 201 | 237 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCg + Tp +Rrgp g+++LCnaCGl+++ kg+ PKA49359.1 201 CQNCGISAklTPAMRRGPGGPRSLCNACGLMWANKGT 237 *****9999*************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MSSSYVGEGP SLGSAPEALS ARGQIDDGDD AGGQPDAVVD HEGATDAADA AMQIVNANHN 60 QLTLLFQGEV YVFDSVTPEK VQAVLLLLGG CEMPSNVSSV VLPCHQDDRG MDDILRRTNI 120 PAKRLASLIR FREKRKERCF DKKIRYDVRK EYFITLMFKH VRMKRRKGQF AGKANPEDEA 180 SPSSSCDPAS SQDDTPRETN CQNCGISAKL TPAMRRGPGG PRSLCNACGL MWANKGTLRN 240 VTKSSKMTTL THSDPNGMVD GVNSVMGSEN KPRSTSNDQV SVMATSEIFA GEMPADVHPG 300 MEDEQKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 8e-59 | GATA family protein |